Apteryx rowi (Okarito brown kiwi): 112975734
Help
Entry
112975734 CDS
T07573
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112975734 (RBBP6)
Enzymes [BR:
arow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112975734 (RBBP6)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
U-box type E3
112975734 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
112975734
NCBI-ProteinID:
XP_025941996
Ensembl:
ENSARWG00000002969
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETAFRSRTEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMNDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQQQQQQQPPPP
PPPPPPPPLMRQTITRNLQPLLRPTISRQQDPLMIPLAALSSHSAAALSLAPGQSSLAAA
LPVNPSSAAVSDLPPAVSLSLRSEKPDGPFHDADVIPPAALVTASELVKSSSVLSISSLM
EEKGYQVPVLRQPALQSLLGSQGQSIPTTGQPMRASTVRSAGSRPGWEPSSNRGRPHSER
TQRTQAPTLPASTPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVP
PPGYPPAPANMSSAWVPTAVPTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDE
FTNDFAKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFS
RSHSRSYSRSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPIFRGQSP
TKRTIPQGEGEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFY
KGYAVGAQPRPPVNRENFSPERFGPPGARRENSPYTRGRREDYAGGQSHRNRNIGGNYPE
KPSGRESHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNAELLEGARKP
REPVTAEDIKADSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKVDKTK
RKAEVAVPPKKDSIIKPTKASQEKVDTDREKSPRTEPPAKKAKEELPKTDSVKTSSSQKD
EKTLGTPRKVHPKVTKDHPETRPAKEEKTKKDHPKEIKSEKPSNKDEKSKKTVEKSKPSD
AKPEKRKRKADEKVDKEHEATSIKASKPETAESKTSPKGKTEPDGEKTERTPEKDKSAFL
TTPAKKIKLNRETGKKIVSGENVPPAKEPAEKPEPSSSKVKQEKVKGKVRRKVTAADGSS
STLVDYTSTSSTGGSPVRKSEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWD
KDDFESEEEDIKSTQVPSNVGKPASVVKNVSAKPPNPVKHNEKEAEPLEKTQKTTKEASY
ESSQHDAKGSKSSMSNEKGKTKDRDHSLSDKDTSEKRKSSVQPEKDHSERGTEQGNGKNI
SQSSKESRSSEKHDTGRGSTAKDFTPNRDKKSDHDSNRDHSSSKRRDEKSELARRKDSPS
RNRESTSGQKSKPRDERAEPSKKSTGDSKRSSYSPPRDRRQSDHKAAHDSKRSLEEHKPP
DKNSGKEKEKHVSEVKSNKEKEPGGNKPSLRLESPDAKNEKENVTGQNDKSIIKPKPQVS
NSSRLSSDLTRETDEAAFVPDYNESDSESNVSAKDEETAGKNSKEPKEKPVDKVKEETAA
PTADQPDASRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKDKKKHK
KHKKHKKHKKHAGNESELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTI
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtccactacaagttctcctccaagctgaactatgatacggtcaccttcgac
ggcctccacatctctctgtgcgacctcaagcgccagatcatgggccgcgagaagctgaag
gcggctgactgcgacctgcagatcaccaacgcccagaccaaagaagaatacacagatgat
aatgccctgattcctaagaattcatcagtaattgttagaagaatccctattggaggagtt
aaagctacgagcaaaacatatgttatgactcctaaatcgcacaaaatcctagaaactgct
ttcagaagtcgaactgaaccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgaa
gaagataaaataaaagctatgatgtcacagtctggccatgaatatgatccgatcaactac
atgaagaaacccttgggtccacctccaccatcatatacttgctttcgttgtggaaaacct
ggccattatataaagaactgcccaacaaatggggacaaaaattttgagtctgttcccagg
attaaaaagagcacaggaattcccaggagtttcatgatggaagtgaaagatcccaataca
aagggtgctatgcttacaaacactggaaaatatgcaataccaaccattgatgcggaagct
tatgctataggaaagaaggaaaagcctcctttcttaccagaggaaccatcctcctcctca
gaagaagatgatcctattccggatgagttgttatgtctgatttgcaaagatataatgaac
gatgcggttgttattccctgctgtggaaacagttattgtgacgaatgtatcagaacagca
ctattggaatctgaggaacatacctgtccgacttgtcatcaaacagatgtttctcctgat
gctttaattgccaacaagtttctacgccaggccgtgaacaacttcaaaaatgaaactggg
tacacaaagaggctccgtaagcagattcagcagcaacagcagcagcagccacctccacca
ccaccaccaccacccccaccccccctaatgagacaaacaataacacgcaacctgcagcct
ctactcaggccaacaatttccagacagcaggatccactaatgattccattagctgctctg
tcttctcattctgctgctgctttgtcattggctcctgggcagtcatctttggcagctgct
ctgccagtaaatccgtcttctgccgctgtctctgatctccctccagcagtgtccctatct
ctccgctctgaaaagccagatggaccttttcatgatgctgatgttatacctcctgctgct
cttgtgactgcctctgaacttgttaaatcatcttctgttctgtcaatcagcagtttgatg
gaagagaagggctatcaggttcctgtactaagacaaccagcattacaaagtcttctaggc
tcacaaggacaatcaatacccacaactggtcagccaatgagagccagtacagtacgctca
gcaggcagcaggccaggctgggaaccaagttcaaatcgaggacgcccgcatagtgaacgt
acacaaaggactcaggccccaacactaccagcatcaacaccagtctttgtgcctgtgcct
ccacctcccttgtatcctccacctccccatgcacttcctcttccaccgggggtaccacca
ccacagtttcctcctcagtttccacctggtcagcctccatctgctgggtacactgtcccc
cctccaggatatcccccagctcctgcaaacatgtcatcagcttgggtaccaacagcagta
ccaacggctcattcaaataccatcccaacgacacaagcacctcctttatctagggaggag
ttttacagagaacaacggagacttaaagaggaggaaaagaaaaagtccaaacttgatgag
tttacaaatgattttgctaaggaattgatggaatataaaaagattcaaaaggagcgtagg
cgttcgttttccaggtccaagtctccctatagtgcttcatcttactctagaagttcatat
acctactccaagtcaagatcaggttcttcccgctcccgctcctactctcggtcgtttagt
cgttcccattcacgttcctactcacgatcacctccgtatccaagaagaggcaaaggaaaa
agtcgtaactatcgttctaggtcaaggtcacatggttatcaccgctcgaggtcaagatca
ccaccgtatagaagataccattcacgatcaaggtctccaatatttagaggccagtctccc
accaaaaggactataccacaaggggaaggagaaagggagtattttaacaggtacagagaa
gttccaccgtatgatatgaaagcttactatggccgatctgttgattttagagatccattt
gaaaaagaaagatacagagaatgggaaaggaattatagagaatggtatgagaagttttac
aagggctatgctgttggagctcaacctcgacctccagtaaatagagagaacttttctcca
gagaggtttggtccacctggagccagacgagagaattcaccatacactcggggacgtagg
gaggattatgctggtgggcaaagccatagaaatcgaaatataggtggaaattaccctgaa
aaaccttctggaagagagagccatggcatcaaagatcctacaaaatcaaaagaaaaggag
gtggaaaatccactgggagatggcaagggaaataaacataaaaaacaccgaaagagaaga
aaaggcgatgaaaacgaaggatttcccaatgctgagttgttagaaggtgcaagaaaacca
agagaaccagttacagcagaagacatcaaagcagactctctgttcatgctccccagtaga
gatgatgctacccctgtgagagatgaacctatggaagcagattctattgcttttaaacca
gtgtctgaaaaggagaaaaaagagaaagataagccaaaagcaaaagttgacaagacaaaa
cggaaagcagaagtagctgttcctcctaagaaagacagtataataaaaccaactaaagct
tcccaggagaaggtagacactgatcgtgaaaaatctcctcgaacagaacctcctgcgaaa
aaagcgaaggaggagttgccaaagacagacagtgttaaaacatcctcatctcaaaaggac
gagaagactcttggtacaccacggaaagttcatccaaaagtgacaaaagatcacccagaa
accagaccagccaaggaagaaaagaccaagaaagatcatccaaaagaaatcaagtcagag
aagccctccaacaaagatgaaaagtcaaaaaaaacagttgaaaaaagcaagccttctgat
gcaaaacctgaaaaaagaaaaagaaaggcagatgaaaaggttgataaagaacacgaagcc
acttccataaaggcctctaaaccagaaactgctgaatcaaaaacgtcaccaaaggggaag
actgagcctgatggtgaaaaaacagagagaactccggaaaaggataaatctgcttttctg
accacccctgcaaaaaagattaaacttaaccgagaaaccggcaaaaagattgtgagtgga
gaaaatgtaccacctgcaaaagaacctgctgagaaacctgagccaagcagcagcaaagtt
aaacaagaaaaagtgaaaggaaaagtgagaagaaaagtaacagcagctgatggatctagt
tcaactctcgtagattataccagcactagttctactggaggaagccctgttagaaagtct
gaagaaaagccagatacaaaacgaactgttattaagaccatggaagagtataataatgat
ataactgcccctgctgaagacgtcattattatgatccaggtccctcaatcaaagtgggat
aaagatgactttgagtccgaagaggaagacattaaatctacccaggtaccctcaaatgta
ggaaaacctgctagtgttgtaaaaaatgtaagtgctaagcccccaaaccctgtgaaacac
aatgaaaaagaggctgagcctttggaaaaaacacaaaaaactacaaaagaagcaagttat
gaaagttctcagcatgatgcaaaaggttcaaaaagctcaatgtcaaatgaaaaggggaaa
accaaagaccgggatcattctttgtcagacaaggacacttctgagaagagaaagagcagt
gttcagccagaaaaagaccactcagaacgtgggactgaacaaggaaatggaaaaaatatt
tctcaatcttccaaagagagcagatcttcagagaaacatgatactgggcgtggatccact
gctaaagactttactcctaaccgagacaaaaaatctgaccatgatagcaacagagatcat
tctagttccaagcgcagagatgaaaagagtgagttagcaaggagaaaagactcaccttct
cgaaacagagaatctacatcaggacagaaaagtaaaccaagagacgaacgagcagagccg
tccaaaaagagcactggagattccaaaaggagcagctacagtcctccacgtgaccgaagg
cagtctgatcacaaagctgctcatgattccaagcgttcattggaagaacacaaacctcca
gataaaaattcagggaaagagaaagagaaacatgtatcagaggtaaagagcaataaagaa
aaagagccaggtggtaataagccatctttgagacttgaatcaccagatgcaaaaaatgag
aaagaaaatgtgactgggcaaaatgataaaagcatcatcaagcctaagcctcaggtaagc
aactcctcacggctctcttccgatttaactcgagaaactgatgaggctgcatttgtacca
gactacaatgaaagtgacagtgagagtaatgtatctgcaaaagatgaagaaactgcagga
aaaaattctaaagaaccaaaagaaaagcctgttgataaagttaaagaggagacagcagca
cctactgctgaccagcctgatgcaagcagaagtcaaagtcaaagcagccctagtgttagc
cgcagtcgtagtcaaagcccttctgagagccagacccgaagccacagcagcagcgccagc
tcaggagagagtcaagacagcaagaagaagaaaaagaaaaaagataaaaagaagcacaag
aaacataaaaaacacaagaagcataagaaacacgctggaaatgaatcggaattggagaag
agccaaaaacacaaacacaagaagaagaaatctaagaagagcaaagataaagagaaagat
gaccaaaaagttaaatctgtcactatatag
DBGET
integrated database retrieval system
