Apteryx rowi (Okarito brown kiwi): 112976071
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Entry
112976071 CDS
T07573
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
arow
Apteryx rowi (Okarito brown kiwi)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_2
NDNF
DUF4998
CBM_4_9
DUF5930
Motif
Other DBs
NCBI-GeneID:
112976071
NCBI-ProteinID:
XP_025942746
Ensembl:
ENSARWG00000009712
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MWIHTCFFFACLTAVSHVWGRVSSQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKP
MAGDSEQEVMLKTKTPKATVAGLSPTKEYXLQVYVLNGSQEALFAKRKFVIEELKNASQT
RNNRRNSGTMSEKNLASSGSSAAEHSSVAEATLPPLNAVLTQTAKDRTEKKRQKGSQSKV
SGEVVGNQPSAEASVTEATPTNTKSPQHTPANSGRESLGKEKPTKDSLKRGSQFQCDTSA
MTDIVLLVDGSWSIGRNNFKLIKEFLSTLISPFNIGQDKIRVGLSQYSSDPRTEWDLNTY
TTRDEVLEAMRNLRYKGGNTFTGLALTHVLEQNLKPESGARLEAEKLVILLTDGKSQDDA
NLVAQTLKNLGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSSLVGRLTRVLC
TRIKEKRNSENTGSTVKDIPVNSSPQLSPTDLKISAVTSKSMHLTWNPPLRPPKKYRIVY
YPSRGGIHKEVILDGAISSLQLANLTSHTEYLVSVFAIYDTVVGDGLRGITSTLPLSPPR
SLRVSELSHNSMRLSWKAAQGATQYLVLCSAAPRGAEDYTVEVKVAQPEVLLDGLSPSTE
YSVAVYAVYGEDASDPASIQETTLALSPPRYLSFSEISHASVRVSWEAASQAVKAHRVTY
VSSRGSNTGEVEVPGTASSAVLRPLSSFTQYFISVRSTYDEGDSSPITGNVTTLKVPPPR
ALKVTELSGNNLQLQWEAVAASDVVVYQIRWSTLSGEKSQELSVAGNVATTXLPSLQKNT
DYKISMWAYYKDGARSDTVSVQHRTNSRSPPTNLFINSETPTSLQVHWKPPDGRIQHYKI
TYSPVSDNSAQQTVMASGKSSSVTLQSLLPDRAYKVTVSAVHNTGESESMSTTGRTAPVL
SKLPSIRGFVPPKAEACPTMSSPEGSVRGIDMMEAFGLVEKEYASIKGVAMEPFIFSGSR
TYTLFKDTQLTQRTSDVHLFAIPPEHTISILLRLLPETSKEPFAVWQITDEDFQPLLGVI
LDSSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYLDCKKIAE
KPINTIGSISTAGFIMLGKVTRTRGPRSGSASFQLQSLRIVCNSLGAEEDRCCDLPALRD
EETCPTLAPACTCTSGLPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPEGPS
GQQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEG
TAGPPGPPGPRGFQGVTGSRGSSGEKGLPGDVGPTGLPGPKGERGEKGEPQSLATIYQLV
SQACERMIQTHVLKFDSFIHEHARKPVPVWEEKLKPGEPGPPGPPGPPGSNGERGENGIP
GQPGKDGYPGERGAPGPKGEKGMSGASEEGIQGPRGRTGPPGEIVLGKPGPKGSPGNAGP
QGFPGVRGHPGQPGYPGGCDISGCYGTGRRDFIP
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcacacttgcttcttttttgcctgcctgactgcggtgagtcatgtctggggc
cgagtgagcagccaagggtcaggtcgactgaagctcactgtcctttcggaagacaggctc
caaatgaaatggaaagaaactgaagggaacatcaatggctacaaagttcgggtaaagccc
atggcaggggactcggagcaagaagttatgctgaaaaccaagactcccaaagccacagtt
gcagggctgagccctaccaaggaatacaygttgcaggtctatgtgcttaatggctcccag
gaagccctgtttgccaaaaggaaattcgtaattgaggagctcaaaaatgcatcccagact
agaaataaccgaagaaactcaggaaccatgtcagaaaagaatctcgcttcttcagggagt
tcagcagccgagcatagctcagtggcagaggccactctaccacccctgaatgcagtcttg
acacagacagcaaaggacagaactgaaaagaaaaggcagaaagggagtcagtcaaaggtc
tcaggcgaagttgtgggaaaccaacccagtgctgaggccagtgtgacagaagcaacacca
acaaacactaaatcaccgcagcacactcctgcaaactcaggacgagagtctctaggcaaa
gaaaaacccacaaaggattcattgaagagaggttcccagtttcagtgtgacacatctgca
atgactgatatcgtcctgcttgtggatgggtcttggagcatcggacgcaacaattttaag
ctaattaaagagttcctgagcactttgatttcccctttcaatattggccaggacaagata
agagtagggttgtcccagtacagtagcgatccccgcacagaatgggatttgaacacttac
actacgagggacgaggtgctggaggccatgaggaacttgaggtacaagggcggcaacaca
tttacaggcctcgctttgacccatgtcctggaacagaatttaaaaccagaatctggtgcc
cgactggaggcggagaaattggtgatcctcttgactgacggaaaatcccaagatgatgcc
aacctggttgctcagaccttgaaaaacctgggtatagagatatttgccattggggtgaaa
aacgctgatgaggcagagctgaagcaggtggcctcagagccactggagctcacagtgtac
aacgtgctggatttccccttgctgagctctctggttggcaggctcacccgggtcttgtgc
accaggatcaaagagaagaggaacagtgaaaacacaggtagcactgtgaaagatatccct
gtgaactcgagtccccagttgagcccaactgaccttaaaatatcagctgtgacctctaag
agcatgcacttgacctggaatcctcctctgagaccaccaaagaaataccgtattgtgtat
tatccatctaggggtggcatccacaaagaggtgattttagatggagcaatctcctctttg
cagcttgccaacttgacttcacacacagaatatctggtgtcagtgtttgctatttatgac
actgttgtgggagatgggctgagaggcatcacctccacattgcctttgtctcccccccgt
tccctgcgcgtctctgagctgagtcacaacagcatgaggctgagctggaaggcagcacag
ggagctacgcagtacctggtgctctgctcagcagcccccagaggagcagaggactacaca
gtggaggtgaaagtggcccagcctgaggttctgctagaygggttgtcgcccagcacagag
tactctgttgcggtgtatgcagtgtatggggaagatgcragtgatccagccagcatccag
gaaaccaccttggccttgagtcctcctagatacctgagtttctccgagatcagccatgca
tctgtcagagtcagctgggaggctgcgtctcaggcagtgaaagctcaccgtgtgacctac
gtctctagcagagggagcaacactggggaggttgaggttcctggcactgcatcatccgct
gtcctaagacctttgtcctcgttcacgcagtactttatcagtgtcagatctacatatgat
gaaggcgactcctctccaattactggcaatgttaccacattaaaggtccccccgccgcgt
gcactgaaggttaccgagctctcaggaaacaatcttcaactgcagtgggaagctgtcgct
gcttcagatgtggttgtctatcagatcagatggagtaccctcagtggagagaagtctcag
gagctctctgtcgctggaaatgtggcaaccaccrttctgccaagcttgcagaagaacacg
gactataagatatccatgtgggcctattacaaagatggtgctcgaagtgacacagtttcg
gttcagcacaggacaaattcccggagcccacccaccaacctcttcatcaactctgagacc
cccaccagcctccaggtccactggaaaccccccgatggccgcatacagcactacaaaatc
acctacagccctgtttctgataacagcgctcagcaaacagtaatggcttctggcaaaagc
agcagtgtcaccctgcagtccctgctgcctgaccgagcctacaaggtgactgtttctgct
gtccacaacacaggagagagcgaaagcatgtccacaacaggccgaacagctcctgtattg
tctaaactcccttcaatacgaggatttgttccacctaaagcagaggcctgccccaccatg
agctctcctgaaggctctgtacgaggaattgatatgatggaagcttttggattagtagag
aaggaatatgcctccattaaaggagtagctatggagccattcatattcagcggttcccgt
acctacactctgttcaaagatactcagctcacccagagaaccagcgacgtgcacctcttt
gcaattccacctgagcacaccatcagcatcctgctccgcctcctgcccgagacctccaag
gaaccctttgctgtgtggcaaataacagatgaggacttccagcctctccttggtgttatc
cttgactccagtaagaaatccttgacctatttcaatcatgactacaaggctgatttacag
gaagtctcctttgaccaacaggaagtgaagaagatattctatgggagctttcataaggtg
catgtggcagtgagccatttcaagatcaaactctatctggactgtaagaaaatagcagag
aaacctatcaacaccattggtagcatctccactgctggcttcatcatgctgggaaaagtg
acaaggactagaggaccaaggagcgggtcagcatcgttccagctgcagtctttgcggatt
gtgtgcaacagtttaggggcagaggaagacagatgctgtgatcttcctgcattgagggat
gaagagacctgccctaccttagctcctgcctgcacttgtacgtctggcctcccaggctta
ccaggacctccagggccccctggcagccctggaaggagaggaccacaaggggaacaaggg
gagccggggcccaagggtgaaccaggtccacctggacaagtgggaccagaaggtcctagt
ggccagcaaggctctccaggttcccaagggatcacggttcagggtcctgtgggaccacca
ggaattaaaggagagaaaggagacactggaagtcctggcatgcagggtattcctggtgtg
cagggagctccaggcagggatggtcttcaaggtgcaaagggggtgagaggactagaaggt
acagctgggcctccaggaccacctggaccaaggggtttccaaggagtgacaggctcccga
ggcagcagcggagagaaaggacttccaggtgatgttgggccaacagggcttccaggtcca
aaaggagaaagaggagagaaaggggaaccacaatccttggccacaatttaccagctagtt
agccaggcttgcgagcggatgattcagactcatgtgttgaagtttgactcattcattcat
gaacatgcaaggaaaccagttcctgtttgggaagaaaaattaaaaccgggagaaccagga
ccaccaggtcctccaggtccccctgggagtaatggagaaagaggagaaaacggcatcccc
ggacagccaggcaaagacggatatcctggagaaagaggtgcaccagggcccaagggtgaa
aaagggatgtctggagccagtgaggaaggaatccaaggacccagaggcagaacaggccca
ccaggagaaatagtgctggggaaaccaggtccaaagggatcccctggaaatgctggtcct
caaggtttccctggtgtcagagggcatcctggacagcctggatatccagggggttgtgat
atctctggatgttatgggacaggtagaagagatttcatcccctga
DBGET
integrated database retrieval system