Apteryx rowi (Okarito brown kiwi): 112976116
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Entry
112976116 CDS
T07573
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04510
Focal adhesion
arow04512
ECM-receptor interaction
arow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112976116 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112976116 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112976116 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arow04147
]
112976116 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
arow00536
]
112976116 (COL4A3)
Exosome [BR:
arow04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112976116 (COL4A3)
Glycosaminoglycan binding proteins [BR:
arow00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112976116 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112976116
NCBI-ProteinID:
XP_025942807
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MRNCVCKGKSPCFCDSMKGNKGEKGFPGIPGPPGLRGFPGPEGPPGPQGPKGSPGLIGLP
GSKGIRGVPGIPGFSGPPGLPGEPGTVGPPGRPGVPGCNGTKGDRGFPGPPGRRGTPGVP
GIPGIKGEKGCPVDGYNQDYGAKGDPGLPGMPGLQGSQGIQGYPGEIGPQGPPGVSGVPG
RAGPPGPKGLMGMKVIGNKGRKGDTGLTGPPGPPGTVIVTLSGPDNVTDLKGEKGEKGSR
GLPGPVGFTGPVGDSQSEKGDRGEPGVQGKPGKEGAPGPPGLPGQKGEQGKPGLTGKQGA
KGTKGNTGPPGACGRTEYYDKVVGEKGDEGLPGPPGPKGQRGVPGPRGPPGDAGRPGVSR
PGLRGPPGFPGPKGIKGEKGRSGLHIVGPPGLPGITGRPGSVGLPGPPGEPGRITFRTGL
PGLPGEPGCVGPPGPPGDTGTKGDEACVCTDCSYIPGTPGLPGSPGPHGQDGIRGREGTP
GPKGSPGSPGARGFPGPQGLPGFKGDQGHKGSKGDPGYVYPEGPKGEQGDPGAEGDKGRK
GSSGFLGRPGSKGSKGSKGEQGLAGSKGDRGLPGLPGNPGLAGEMGLPGPPGYGPQGTRG
LKGSKGVSGPPGLPGETGLKGETSMVTPLPGLPGPQGPAGLPGPPGVPGRVGARGQPGDS
GHPGPTGDTGFPGLGFPGNPGPKGDKGLAGGRGSPGCEGKIGDPGRSGNLGLPGGKGDPG
MVIPGEPGRTGSPGGSGIPGPKGDIGFPGLPGLPGHAGCDGDDGLRGDPGSPGIPGDPGF
PGKPAECLIGLPGLPGGEGATGPPGGRGLLGSKGKLGPPGLGIPGIFGNPGEPGLIGPQG
NAGLPGPRGQSGRPGISGVPGPRGEPGIMGPLGVPGPPGAFGSPGHPGNRGSFGFPGLKG
RKGFLGQKGEPGDKGFPGPSETLVGIGNKGERGSKGFQGRMGLKGEKGDAGVQGPPGLVG
LEGIPGLPGVKGFMGLPGIPGGQGFPGAPGNKGDMGIPGPKGQKGSPGFPGPSGDSGQVG
SGGSPGDKGDPGYPVPGPPGEPGPKGDPGPPGGLGSKGEKGSQGQPGHTGVPGPDGIRGK
SGGTGIPGEEGLPGGVGAKGLQGLPGQMGTRGPPGAVGDPGENGLVGERGNQGQDGVPGT
PGDKGEPGVPGRGIPGLRGIPGRKGIKGDMGLPGFPGPPGMKGCRGNQGPIGPPGLMGFP
GFRGATGMAIPGRKGNRGIAGADARPGAPGFPGPPGLPTPSIKGSKGVRGADGIPGPTGP
KGNIGPPGPKGMEGRSGFPGARGDPGFVGFPGVKGEKGNQGPPGPQGAEGPRGPKGQHGP
PGVPGRVFSVPGNKGSPGLPGRPGTPGDQGIQGIPGLQGPKGVKGLPGTFGSPGQPGLPG
PKGDRGFPGQRGPPGLIGFPGLQGLPGSPGVIIPGPTRRGFIFTRHSQSTKIPACPYGTS
QIYTGYSLLFVQGNEQAHGQDLGTAGSCLQRFTTMPFLFCDTNNVCNFASRNDYSYWLST
AAAMPVDMAPISGRALEPYISRCVVCEGAAMVIAVHSQTTVVPACPEGWTSLWKGFSFVM
YTSAGSEASGQALASPGSCLEEFRAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRKP
VPQTLKAGELENIISRCQVCMKRPV
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgagaaactgtgtatgcaaaggtaaaagtccctgcttttgtgatagcatgaaaggtaat
aagggcgaaaaaggctttcctggcattcctggtccacctggtcttagaggctttcctggc
ccggaagggcccccagggccacaaggacctaaaggttctccagggcttatagggttacct
ggatctaaaggtatacgaggagtcccaggaatacctggattttcaggtccccccgggctt
ccaggtgagccgggaactgttggtcctcctgggcgcccgggtgttccaggatgcaatggc
acaaagggcgatcgaggttttccaggtcctccaggtagaagaggtactccaggtgttcca
ggtatccctggcatcaaaggagaaaaggggtgccctgtagatggctataaccaagactat
ggtgcaaaaggtgaccctggattgcctggaatgcctggacttcagggttcccagggtatt
caaggatatcctggggaaattggaccacagggccctccgggagtttcaggagtgccaggg
agagcaggacctccaggacctaagggtctcatgggaatgaaagtaataggaaacaaagga
agaaagggtgacacgggattaactggaccccctggaccaccaggaactgttattgtgaca
ttaagtggaccagacaacgtgacggacttgaaaggagagaaaggagaaaaaggatcaaga
ggactcccagggccagtggggtttacaggaccagttggtgattctcagagtgaaaagggt
gaccgaggagaacccggagtgcagggtaaacctggaaaagaaggtgccccaggtccacct
ggcttaccgggacaaaagggtgaacagggcaaaccagggttgactggcaaacaaggagct
aaggggacaaaaggaaacaccggtccacctggagcttgtggtcgaacagagtattatgat
aaagtggttggtgaaaaaggagatgaaggactccctggacctccaggaccaaaaggtcaa
cgtggtgtgcctgggccaaggggtcctcctggagatgctggaagaccaggtgtgtcaaga
cctggtctgagaggtcccccaggatttcctggaccaaaaggaataaaaggagagaaagga
cgatctggcttgcacattgtaggccctccaggactacctgggattactggcagacctggt
tctgttgggttaccgggtccccctggagaaccaggtagaataacatttagaactggccta
ccaggacttcctggagagccagggtgtgtgggacctccaggacctccaggagatactggc
acgaaaggtgatgaagcttgcgtgtgtactgattgcagctatattccaggaacacctggt
cttcctggttctcctgggccacatggccaagatggcatacgtggtagagaaggaacacca
ggtcccaaaggatctcccggttctccaggagcacgggggtttccagggcctcaaggactt
ccaggttttaaaggagatcaaggacataaaggatcaaaaggtgatccaggatatgtgtat
ccagaagggccaaaaggtgagcaaggagatccaggggccgagggagacaaaggaagaaaa
ggttcaagtggatttctgggaagacctggctctaaaggctcaaagggttctaaaggcgaa
cagggattagctggttcgaaaggagacagaggactgccaggattgcctggtaatcctggt
ctcgctggagagatggggcttcctggaccaccaggatatggaccacagggaacaagaggt
ctcaaaggctctaaaggagtatctggtccacctgggttacctggagaaactggtctgaaa
ggagagaccagtatggtaactccattacctggattaccaggaccacagggaccagctggt
ttacctggacccccaggagtgcctggcagagttggagctagaggtcagccaggtgattca
ggacacccagggccaacaggtgacacaggctttccagggcttggatttcctggaaaccct
ggtccaaaaggagataaaggacttgcaggaggaagagggtcaccgggttgtgaaggaaaa
attggagatccaggccggtctggaaatctaggactgccaggaggaaagggtgatccaggc
atggttattcctggagagccaggtagaacaggttcaccgggaggtagtggcattcctggc
ccaaaaggtgatattggatttccaggacttccaggcctaccagggcacgctgggtgtgat
ggtgatgatggcctaagaggagatcctgggtcacctggaattcctggggatccaggtttt
ccagggaaacctgcagagtgtcttattggtctgccaggtttgccaggtggggagggagct
acaggcccaccaggaggaagaggtttgctaggttcaaaaggaaaactaggccctcctggc
ctgggtatcccaggaatctttggaaaccctggggaacctggactaataggtcctcaggga
aatgcaggattacctggtcccaggggacagtctggaaggccaggaatctctggtgtgcca
ggcccaaggggagagccaggtatcatgggcccattaggagttcctggaccccctggcgca
tttggaagcccaggccacccgggtaacagaggttcttttggcttcccaggactaaaggga
agaaaaggatttctaggacaaaaaggtgaaccaggtgataaaggttttcctggaccatct
gagactttggttggtattgggaataaaggagaacgaggctcaaaaggatttcaaggaagg
atgggtctaaaaggagaaaaaggagatgcaggtgtgcaaggaccaccaggtcttgttggg
ttggaaggaatacctggcctaccaggtgtcaaaggatttatgggtcttccagggattcct
ggaggacaaggattcccaggagcaccaggaaacaaaggggacatgggaattccaggtccc
aaaggacagaaaggatctccaggctttccaggaccatcaggtgactctgggcaagtaggc
tctggtggctctccaggtgacaaaggagaccccgggtacccagttcctgggcctccagga
gaacccggtccaaagggagacccgggtcccccaggaggtttaggcagcaaaggagaaaaa
ggatcccaaggccagccaggacatacaggagtaccaggaccagatgggatcagagggaaa
tctggaggcacaggaatcccaggggaagaaggacttcctggaggtgttggggctaaagga
cttcagggcctcccaggacaaatgggcactagaggtcctccaggtgctgttggagaccct
ggagaaaatggacttgttggtgaaagaggtaatcaaggtcaggatggtgtgcctggcacc
ccaggagataagggagaaccaggggtgccaggcagaggaatccctggcctgcgaggtatt
cctggtcgtaaaggaatcaaaggggacatggggctgcctggttttcctgggccaccaggt
atgaaaggttgtcgggggaatcaaggacccattggacctcctggcttgatggggttccct
ggattccgaggtgcaacaggcatggcgattcctggccgaaaagggaacagaggtattgct
ggtgcagatgcaagaccaggtgctcccggttttccagggcctcctggtcttcccactccc
agcatcaaaggaagcaaaggtgttagaggggcagatggcataccagggccaacaggccca
aaaggcaacattggtcctccaggtccaaaaggaatggaaggtcgatcaggttttcctggt
gctagaggggatcctggatttgttggatttccaggtgtaaaaggcgaaaagggtaatcaa
ggacctcctggaccacagggtgcagaagggccaaggggaccaaaaggccaacatggtcca
cctggagtccctgggagagtattctctgtcccaggaaacaagggatctcctggactaccc
ggaagaccaggaacaccaggtgatcaaggaattcaagggattcctggactacaaggacct
aaaggagtaaaaggtctaccaggaacttttgggagtccaggtcaaccaggactgcctggt
ccaaaaggagacaggggatttccaggtcaaagaggaccacctggactgattggctttcca
ggtctgcaggggttacctggatcaccaggtgttatcatccctggtccaacaagaagaggt
tttatctttacccggcatagccaatcaaccaagattcctgcatgcccctatgggacatca
cagatctacactggctattcgctgctttttgtacaaggaaatgaacaagcacatggacaa
gaccttggaacagctggtagctgcttgcagcgatttaccaccatgccattcttattctgt
gacaccaataatgtttgtaattttgcttctcgcaatgattattcatactggctgtcaact
gcagcagcaatgccggtagacatggcaccaatttctggcagagcactagaaccctatata
agcaggtgcgttgtctgtgaaggagctgcaatggtaatagcagttcacagccaaacaact
gtagttcctgcatgtccagaaggctggacgtctctgtggaagggtttttcttttgttatg
tatacaagtgctggctcagaagcttctggccaagcattggcatcacctgggtcttgcctg
gaagaatttcgagccatcccattcatagagtgccatggcagggggacgtgcaactactac
acaaattcctacagcttctggttggcatcgctaaatccaagaagaatgttcaggaaacct
gtgccacagactttgaaagcaggagaattagaaaacatcatcagccgctgtcaggtctgc
atgaaaagaccagtctaa
DBGET
integrated database retrieval system