Apteryx rowi (Okarito brown kiwi): 112976144
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Entry
112976144 CDS
T07573
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112976144 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112976144 (TRIP12)
Enzymes [BR:
arow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112976144 (TRIP12)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
HECT type E3
112976144 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
112976144
NCBI-ProteinID:
XP_025942848
Ensembl:
ENSARWG00000002023
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVIIPQQEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YSRTNSPSSAKKPKALQHTETSLETSKPHTKSKKRHLDQEQLKCAQLPSTSKAHTRKGGA
AGSSRSQKRKRTESPSCIKSASAVESTGAEERSAKPSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEQSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLSTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgaacagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttataataccacaacaagaagatccagaaagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacagcaggaccaattctcccagctctgctaaaaaacccaaagcacttcagcacactgaa
acttccttggaaactagcaagccacatactaaatctaagaagagacacttagaccaagaa
cagctgaagtgtgcacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagagcccatcttgtataaagagt
gcttcagcagttgaatcaactggcgctgaagagaggtcagcaaaaccctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttccacatcctcctcctcttctgctgttgcctctgcttcctccaccgttcctcagggt
gccagagtaaaacaaggaaaggaccagaataaggctagacgttcccgttctgcatccagt
cccagtccaagaaggagtagcagggataaagaacagagtaaaacaggtggctcttcaaag
tttgactgggctgctcgcttcagcccgaaagttagcctgcctaaaacaaaactgtctcta
ccaggctcttccaagtcggagacatcgaaacctggaccttcaggactacaggcgaaacta
gcaagtctacgaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaagagaagatggctgatccg
gataacaaccaggatggagttaactcttcagctgcgcgtacagatgaggctccccaggga
gctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagtgag
tcagatgactctgagatgggaagactacaagctctgttagaggctaggggtctccctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagcccaacagcttctacaaggtctccaagccactgatgaaagtcag
caactgcaggcagtgattgagatgtgccagctgttggtcatgggaaatgaagaaacatta
ggaggatttccagtcaagagtgttgtaccagctttgataacattgctgcagatggagcac
aactttgacattatgaaccatgcttgtcgggccttaacgtacatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaggttatt
cagtgcattgatgtggcagagcaggcactgacagccctggagatgttatcgcgcagacat
agtaaagctattctgcaggcaggtgggttggcagactgcttgctgtatctggaattcttc
agcataaatgcacagaggaacgcgctagctattgctgctaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccat
caggataaaaagtccgttgaaagcacttgtctctgttttgcacggctagtggacaacttc
cagcatgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatatccag
caactcttggtagtgactcctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctacacttgcagtgcaacttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaa
attgaccttgttccacgaagtcctcaagaactttatgagcttacttctcttatttgtgaa
ctgatgccttgtctgccaaaagaaggaatctttgctgttgatactatgctaaagaaagga
aatgcgcaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctttggcat
ccctataacaggattgatagtcgaataatagaggcggctcatcaggttggtgaggatgag
ataagcctgtctacacttgggcgtgtctatactattgattttaattctatgcagcaaata
aatgaggataccggaacagcacgtgccattcagcgaaaaccaaaccctttagccaatacg
aacactagtggacattcagaactgaagaaggatgatgctcgagcccagctaatgaaggag
gacccagagttggctaaatcctttatcaaaacattatttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtcctgaaaaaccatgctgtttcaagtcac
attgcctctatgctgtcgagtcaagaccttaagatagtagttggagcccttcagatggcg
gagatcttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaaaaacttagcagagtctgaagctttgctgacaagcccaccaaaagta
tgcactaacggatcaggaacgctgagtaccactacaacaataagcactggaacagccact
gctgccagtaatgcagctgcagatttgggctcccccagcttgcaacacagcagggaagat
tctctggatttgagcccgcaaggacgactgagtgatgttctgaagagaaaaagactgcca
aaacgagggccaaggagaccaaaatattctcctccaagagatgatgataaagtagacaat
caagctaaaagccctacaactactcaatctcctaaatcttccttcttggcaagtttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaataatattgaaccagcacga
acagcaggagttagtggtcttgcaagggctgcttccaaggataccatttccaataacaga
gaaaaaattaagggctggattaaggagcaagcccataaatttgtagaacgttattttagc
tctgaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggagtctgacgtctcctcatttgaaatccagcacagtgggtttgtgaaacaa
ctgctgctttatttgacatccaaaagtgagaaagatgctgtaagcagggatatcagattg
aaaagatttcttcatgtatttttttcttctccactccctggagaagaaccccttggaaga
ttagagccattagaaaatgcacctttgttggcgttagtccacaaaatgaataattgcctc
agccagatggaacagtttccagtcaaagtacatgacttccctagtggaaatggaacaggg
agcagtttttctcttaacagaggatctcaagctttaaaattcttcaacacacatcaatta
aaatgccaactgcaaagacatccggactgtgctaatgtgaaacagtggaagggcggacct
gtgaagattgatcctctggctttggtacaggccattgaaagataccttgtagttagaggt
tatggcagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcaattcttaaattcaggtaatgtgagacacagactacaattt
tacattggggatcacttgctgccgtataatatgactgtgtatcaagcagttaggcagtac
agtttacaagctgaggaggagagggagtctacagatgatgaaagcaacccgctgggaaga
gctgggatttggacaaaaacgcataccatttggtacaaacctgtgcgagaggatgaagat
ggtaataaggactgtgttggtggtaaaagaggaagagcacaaactgctcctacaaaaacc
tcccctagaaattctaaaaagcatgatgagttgtggcatgatggtgtatgcccttcggta
ttaaatcctttagaagtttacctcatatctactccacctgaaaacataacatttgaagat
ccatcattagacgttattcttcttttgagggttttacatgctatcagtcgatattggtat
tacctgtatgataatgcaatctgcaaggagattattccaacctcggaatttatcaacagt
aaactgacagcaaaagcaaacaggcagctccaggaccctttggtcatcatgacggggaac
ataccaacgtggctgacggaacttgggaaaacatgcccgtttttctttccatttgatact
cgacaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactg
gatactaatccagaaatcaatcaatcagactctcaggatagcagagtggcaccaagactg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcaca
ggcctaggccccacactagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctctggaggggagaagaagtaacattagccaatccgaaaggaagtcaggaagga
accaagtatattcataaccttcaaggccttttcgcacttccctttggtagaacagccaag
ccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaag
gccatcatggattttagactggtggaccttcctcttggacttcctttttataaatggatg
ttacgacaggagacttccttgacatcacatgacttgttcagtattgatccagtagtagcc
aaatcaatatatcatcttgaagatattgtaagacaaaagaaaagacttgaacaggacaaa
acacagaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctca
gtggaagatctagggctggacttcacgcttcctgggtttcctaatatagagctgaaaaaa
gggggaaaagatataccagtcaccatccacaatttagaggagtatctcagattggttata
ttctgggcactaaatgaaggtgttgccaggcagtttgactccttcagagatggatttgaa
tctgtcttccccctcagtcatcttcagtatttctatcctgaggagctggagcagctcttg
tgcggcagtaaaacggacacttgggatgcaaagacattgatggaatgttgcaggccagat
catggttatacacatgacagtcgagcagtgaagtatctcttcgaaattctcagtagtttt
gatagtgagcagcaaagactgttccttcagtttgtgaccggtagccccagactgcctgta
ggaggcttccgaagtttgaatcctccattgacaattgtacgcaagacattcgagtctaca
gaaaatccagatgacttcttgccctcagtaatgacttgtgtgaactatctcaaattgccg
gactattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
