Apteryx rowi (Okarito brown kiwi): 112976260
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Entry
112976260 CDS
T07573
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arow03021
]
112976260 (TAF1C)
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
112976260 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
112976260
NCBI-ProteinID:
XP_025943062
Ensembl:
ENSARWG00000017329
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MTSLVEEINRLEARHGCPQQHFTSRVRWFSHLCRDWLFEVPLDLLADCVHDELVLQWASL
LFDDSSTGGALAWLPPEDAGAHTGCLVYPGGQAMNQLYFQDVVVGEVPRARGSPAQFELN
GRIRQVAAAQVDGEGFVGVRSDYHCGVWKVPGRTGAAPTPLQVIRTNVPASCLTVSPHLP
GELAVCTQSGAVYLWSVETGLQQLRQDPQTMFFRDHSPWRWSEFTAHPRVLSCADRTGLQ
CLDARAPGRCHLDFFKVGEEAGCQQGERVVLPMYLGRAHPSQHLVATQFAVYVMDERLPL
VPVLKWAHMMKDPPLFAHVVPGGPGRSHKVLLGASRTQELLLLQYTGGSELACQLAGPPQ
KLHSISGCLQHLPAQLPHRHWLLQQRLGAPAAGLAAVPHARGQRESLLVFQLSEAGDVFY
QTLTHEAAQPRAPAGEDKDEAASSASPMLEAPFGSTPGSPPGSGGEEEEEIFYLSNLEVI
VNEEEEEEEEGTPAASEETQHPEEPCASPHPLPAVPSPAAAVRYRRWLKALFRDWRELPR
HTGVRGPPTISQKRLFTRKDLGPPAGTSDLHVRARQQLRRAMREQGRVRRWDLGPDPQPL
PQPVEPAAWPDALSARLTAAWAGDLSHWWEERLGLNMAQRQRALRERRRRQKRARGHRSL
SASFTSSVTYQSELSELSDGAPAAAPAPPLSPRHPEALPQVFTEAWGGSLAGGSAPGGST
PRXPPPSPPPAEPLLSSQTLRSRGIPKERRKMLRDYLAVCTEGPPEPLPEPPSSQPPSQG
GQLCIPSSQSQLAGSQPRRKRPRMGF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgacatccctggttgaggaaatcaaccggctggaggccaggcatggctgcccccagcag
cacttcacctcccgcgtccgctggttttcccacctgtgccgcgactggctgtttgaggtg
ccgctggacctgctggcggactgcgtgcatgacgaactggtgctgcagtgggccagcctg
ctctttgacgacagctccacagggggggccctggcctggctgccccccgaagacgcaggc
gcacacacaggctgtctggtgtaccccggagggcaggctatgaaccagctctatttccag
gacgtggtggtgggtgaggtgccccgcgcccggggctccccagcgcagtttgagctcaac
ggacgcatccggcaggtggctgccgcccaggtggatggggaaggttttgtcggtgtccgc
tcggactatcactgcggtgtttggaaggtgccgggcaggacgggcgctgcccctacccca
ctgcaggtcatccgcaccaacgtgcctgcctcctgcctcaccgtcagccctcatctcccc
ggggagctggccgtctgcacccagagcggagccgtctacctctggagcgtcgagacgggg
ctacagcagctccgccaggacccccagaccatgtttttccgggaccattcgccctggcgc
tggagcgagttcactgcccacccacgggtgctgagctgcgctgaccgcaccggcctgcag
tgcctggacgcacgggcacctgggagatgccacttggatttcttcaaggtgggtgaggaa
gccgggtgccagcagggagagcgcgtggtgctgcccatgtacctgggcagggctcacccc
tcccagcaccttgttgccacccagttcgcagtgtacgtgatggacgagcgcttgccgctg
gtgcccgtgctgaagtgggcgcatatgatgaaggaccccccgctgtttgcccacgtggtg
ccgggggggcccggcaggagccataaggtgctgcttggcgcgtcccgcacccaggagctg
ttgctgctgcaatacacagggggcagcgagttggcctgccagcttgccgggcctccgcag
aagctgcacagcatctccggctgcctgcagcacctgcccgcgcagctcccacaccggcac
tggctgctgcagcagcgcctcggcgccccagctgccgggctggcagcggtgccgcatgca
cgagggcagcgggagtccctgctggttttccagctctctgaggctggggatgtcttctac
caaaccctgacacacgaggcagcacagcccagggctcccgctggggaggacaaagatgag
gcagcctccagcgcttcccccatgctggaagctccgttcgggagcactcctgggtctcca
cctggctctggtggcgaggaggaggaggagatcttctacttgtccaacctggaggtgatt
gtcaacgaggaggaagaggaggaggaagagggcacgccagcagcttcagaagaaacccag
cacccggaggagccctgtgccagcccccatcccttgccggctgtgcccagccccgctgct
gccgtgcggtaccgccgctggctgaaggcgcttttcagggactggcgggagctgccccgg
cacacgggggtccgggggccccccaccatcagccagaagcgcctcttcaccaggaaggac
ctggggccgccggccgggaccagcgacctgcacgtgcgggcgcgccagcagctgcgccgc
gccatgcgggagcagggccgcgtccggcgctgggacctggggcccgacccccagcccctg
ccccagcccgtggagccggcggcgtggcccgacgccctgagcgcccggctgacagcggcc
tgggccggggacttgagccactggtgggaagagcggctgggcctgaacatggcgcagagg
cagcgggcgctgcgggagcgccggcggcggcagaagcgcgcgcgggggcaccgcagcctc
tcggccagcttcacctcctccgtcacctaccagtcggagctgtcggagctcagcgacggg
gcgcccgccgcggccccggcccccccgctgtcccccaggcaccccgaggcgctgccccag
gtcttcacggaggcctgggggggctccctggcgggtggcagtgccccgggtggcagcacc
ccgcgccrcccgcccccctcgccgccccccgccgagcctcttctctcctcccagacgctg
cgctcccggggcatccccaaggagcggcgcaagatgctgcgggactacctggccgtgtgc
ackgagggtccccccgagcccctgccggagccccccagcagccagccccccagccagggg
gggcagctctgcatcccctcctcgcagagccagctcgcgggctcgcagccccgccgcaag
cgcccccgcatgggcttctga
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