Apteryx rowi (Okarito brown kiwi): 112976344
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Entry
112976344 CDS
T07573
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arow04812
]
112976344 (KATNB1)
Cytoskeleton proteins [BR:
arow04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
112976344 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_RIG_1st
eIF2A
RMC1_N
Beta-prop_WDR19_1st
VPS8_N
WDR54
PROPPIN
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_LRRK2
WD_LRWD1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
112976344
NCBI-ProteinID:
XP_025943244
Ensembl:
ENSARWG00000017719
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MGWKMCITVCNKCLFTLFFAEEITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKP
NCIMSLTGHTTPIESLQINTNEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDF
HPFGSFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHSVKL
WDLAAGKIMFEFTGHTGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATP
VRCVLFNPDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSFAQS
TVSSFVVDLSRVTKSGSVLHGLIRDDKPLVQPTPAGSSLRRIYDRPSTSCSKPQSRVKHN
SESERRSPSSEDDRDEKESKAEIQNPEDYKEIFQPKNSISRTPPRNNEPFPAPPEDEPVT
VKEAVKPSQAVDVQTPLPKPEHSDPIQRPPIASSTPITRTEPSVIPAARNEPIGLKASDF
LPAVKNQSQTELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKNSVDSAVA
INDLSVVVDLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFL
PLITDILAAPPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLL
MAVLE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggatggaagatgtgtataacagtctgtaataagtgtttgttcactttgttttttgca
gaagagatcacagctcacagcagcaacgtgtcctcactagtcctggggaaaagttcaggc
cggctgctggcaactggaggagatgactgtcgggtcaacatatggtcagttaacaagccc
aactgcatcatgagcttgacaggccatacaacacccattgagagcctacagatcaataca
aacgaggaactcattgttgcaggctcccagtcagggtccattcgagtttgggacctggaa
gctgccaaaattcttcgtacgttactgggtcacaaagcaaatatctgcagccttgatttc
catccttttggaagctttgtggcatctggttctctggacacaaacattaagctctgggat
gtaagaagaaaaggctgtgtcttcaggtacaagggtcacacacaagctgttaggtgtctc
cgatttagccctgatgggaaatggttagcctctgctgctgatgatcacagtgtaaagcta
tgggatctggctgctgggaagataatgtttgaatttacaggacatactggcccagtaaac
gttgttgaattccatcccaacgaataccttttggcttctggcagctctgacaggactgtc
cgattctgggacttggagaagtttcaagttgtgagctgtattgaagaggaggccactcca
gtcaggtgtgttcttttcaacccagatggctgctgcttgtatagtggcttccaggattca
ttgcgtgtgtacggctgggagccagaacgctgttttgatgtggtcttggtgaactgggga
aaagtagctgacttatctatctgcaacaaccagctgataggagtttcctttgcacaaagc
acagtctcctcttttgttgtggatctcagcagagtcacaaaatcaggttccgttcttcat
gggttgatcagggacgacaagcctcttgttcagcctacccctgcagggtcctcccttcgc
cgcatctatgacaggccatcaactagctgcagcaagccacaaagcagggtgaagcacaac
tcggagagcgagaggcgcagtccaagcagtgaagatgaccgtgatgagaaggaatcaaag
gctgagatccagaacccagaggactacaaagagatcttccagcccaagaactccatctct
cgaactcctccacgaaacaacgagccctttccagcccctcctgaggacgagcctgtaact
gtaaaggaagcagtgaagcccagccaagctgtggatgtccagaccccgttgccaaagccg
gaacactctgacccaattcagaggccaccaattgcctcctccactcctattaccagaaca
gagccatcagtgattcctgcagcaaggaatgagcccattggcctgaaggcctccgacttt
ctgccagctgtgaaaaaccaaagccagactgagctggtggatgaggaagccatgtcccag
atcaggaaaggccacgagaccatgtgtgtggtgctcactagccgccacaagaacctggac
actgtgcgggctgtatggagcactggtgacattaagaactctgtagactccgctgtggcg
atcaacgatctctccgttgttgtggacctcttgaatattgtcaaccagaaagcgtctctc
tggaagttggatctgtgcactatagtcctgccacagatagaaaaactactccaaagtaaa
tatgaaagttatgtacagactggttgtacctctttgaaactcatactccagcgattcctg
ccactgatcacagacatccttgctgcaccaccctctgttggggtggacatcaccagagag
gaaaggctccataaatgcaagctgtgctacaagcagctgaaaaacatcagcaacattgtc
aagaacaagtctgggctcagcggccgccatggtagtgccttccgggaactgcatctcctc
atggctgtcttggagtga
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