KEGG   Apteryx rowi (Okarito brown kiwi): 112976785
Entry
112976785         CDS       T07573                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow03030  DNA replication
arow03410  Base excision repair
arow03420  Nucleotide excision repair
arow03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:arow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112976785 (RFC5)
   03410 Base excision repair
    112976785 (RFC5)
   03420 Nucleotide excision repair
    112976785 (RFC5)
   03430 Mismatch repair
    112976785 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arow03032]
    112976785 (RFC5)
   03036 Chromosome and associated proteins [BR:arow03036]
    112976785 (RFC5)
   03400 DNA repair and recombination proteins [BR:arow03400]
    112976785 (RFC5)
DNA replication proteins [BR:arow03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    112976785 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    112976785 (RFC5)
Chromosome and associated proteins [BR:arow03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    112976785 (RFC5)
DNA repair and recombination proteins [BR:arow03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     112976785 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    112976785 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA AAA_assoc_2 DEAD DNAX_ATPase_lid Thioredoxin_6 Gp44_lid AAA_22
Other DBs
NCBI-GeneID: 112976785
NCBI-ProteinID: XP_025944157
Ensembl: ENSARWG00000009406
LinkDB
Position
Unknown
AA seq 255 aa
MVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVIEKF
TENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIEEERVDVTEDGMKAL
VTLSSGDMRRALNILQSTSMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFSTAYRK
ITELKTLKGLALHDILTEIHLFVHRVDFPPSVRIQLLIKMAEIEYRLAAGTSEKIQLSSL
IAAFQVTRDLIVAEA
NT seq 768 nt   +upstreamnt  +downstreamnt
atggttttagagctgaaygcctccgacgacagaggcatcgacatagtcagagggcccatc
ctgagcttcgccagcaccaggaccatctttaagaaaggcttcaagctggtgatcctggat
gaagcggatgccatgacgcaggacgcccagaacgccctacggcgagtgatcgagaagttc
accgagaacacccgcttttgcctcatctgcaactacctctccaagatcatccctgccctg
cagtcccgctgcacgcgcttccgcttcggccctctcacccccgagctcatggtgccccgg
ctgcagcacgtcatcgaggaggagagggtggacgtgacggaagatgggatgaaggctctg
gtgaccctctcgagcggcgatatgcgccgagccctgaatatcttgcagagcacctccatg
gccttcggcaaggtgacggaggagaccgtttacacctgcaccggccaccccctcaagtct
gacattgccaacatccttgactggatgctcaaccaggacttctccactgcctaccggaaa
atcacggagctgaagacgctgaagggcttggccctgcacgacatcctcacggagattcac
ctgttcgtgcacagagtcgatttcccgccctcggtccgcatccagctgctgatcaagatg
gcagagatcgagtaccggctggctgctgggacgagcgaaaagattcagctgagctccctc
atcgcggctttccaagtcaccagggacctgatcgtggccgaagcctaa

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