Apteryx rowi (Okarito brown kiwi): 112976866
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Entry
112976866 CDS
T07573
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112976866 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arow03000
]
112976866 (ARID1B)
03021 Transcription machinery [BR:
arow03021
]
112976866 (ARID1B)
03036 Chromosome and associated proteins [BR:
arow03036
]
112976866 (ARID1B)
Transcription factors [BR:
arow03000
]
Eukaryotic type
Helix-turn-helix
ARID
112976866 (ARID1B)
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112976866 (ARID1B)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112976866 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
112976866
NCBI-ProteinID:
XP_025944351
Ensembl:
ENSARWG00000011147
LinkDB
All DBs
Position
Unknown
AA seq
1753 aa
AA seq
DB search
MSQEGYGTRSQPSMAPGKPNHEDLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLP
TGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQS
RSGPISPASIPGSQMPPQPPGSQPESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQ
TGPSMSPHPSPGGQVHPGIGSFQQSNSGGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSG
PGPGMGINANSQMHGQGPSQPCGTMPLGRMPSAGMQSRPFPGNMSSVTPNSPGMSQQGGP
GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYG
NAQAPLMHQPDQYGQGNFPAMNQSGIMGSSSPYTQPMNNSSSLMNPQAPPYSMAPNMVNS
SAAPMGLADMMTPGESKLPLPLKADGKDEGAPQPESKAKDSYSSQGISQPPTPGNLPVPS
PMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKMWV
DRYLTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGT
SSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQ
TPQSTGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNS
MTPNAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEAFMTPGQMPNSGIQDMYNQS
PSGAMSNMSMSQRQQFSYGSGYDRRSDHGLGPEGSMGPPGQSNMVPSNSDPSMYSPNHYP
GHQRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDVYNM
QYGNQQQEMYNQYSNAYTGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQS
SSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWP
SHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKS
PFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIV
TPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLI
DIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKEENDECIDYFDEDEEEGEDEKV
EGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSGL
LHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKSITAT
IDDVLSARPGALPEDSNPGSQAESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITH
WQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYE
KEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWM
VCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLV
RYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQ
HNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVA
SVICDVLFQIGQL
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggaaggctatggaaccagatctcaaccctctatggccccaggaaaacctaac
cacgaagacttgaatctgatccagcaagaaagaccatcgagcttaccagttgaagtcttg
gcctcggaggatgctacatttggacacaaggatttatctggctccattgacgacctgccg
actggaaccgaagcaacgctgagttcagccgttagcgcgtctgggtctacaagcagtcag
ggggagcagagcaaccctgcacagtcaccgttctcccctcacgcctctccacatctctct
ggcatccctggaggtccgtcgccttctcctgtcggctctcctgttggaagcaaccaatca
agatctggtcccatttctccagcaagtattccaggcagtcagatgccaccacagcctcct
ggcagccagccagaatccagctcccaccctgctttgagccagtcaccaatgccacaggat
cgaggtttcatggcaggcatacagaggaacccccaaatgtcacagtatggacctcaacaa
actggaccttccatgtcaccacacccttcacctggaggccaagtacatcctggaattggt
agctttcagcagagtaattcaggtggtacttatgggcctcagatgagccagtatggacca
caaggaaactattccagaccaccaacatacagtggcgtgcccaacacgagttacagtggc
ccaggacccggcatgggtataaatgccaacagtcagatgcatggacaggggccaagccag
ccttgtggtaccatgcccctgggacggatgccatcagctgggatgcagagcagaccattt
cctggaaacatgagcagtgtgacccccaattctcctggcatgtctcagcagggaggccct
gggatgggcccacccatgccaactgtgaaccgtaaggcacaggaggcagctgctgcagtg
atgcaggctgctgcaaactccgctcagagcaggccaccatacattaggtcgcctgcttat
cccagccagtctggggctggcggacgccccatgttttcttcacagcaccccaactatggc
aacgctcaggctcccttgatgcaccagcctgaccagtacgggcaaggcaattttcctgcc
atgaatcagagcggcattatgggatccagctccccctacactcagccgatgaacaacagc
tccagcttgatgaacccgcaggctcctccttacagcatggcccctaacatggtgaacagt
tcagcagcacctatgggtcttgcagatatgatgacacccggtgagtccaaactccccctt
cctctcaaagcagatggcaaggacgaaggcgccccgcagcccgagagcaaggcaaaggat
agctacagctctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttcc
ccaatgtccccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcatt
agcagcccaggctggccaaagactccatcaagccctaaatcaagttcctctaccacaact
ggagagaagatcacaaaagtctatgaactaggaaacgagccagagcgcaagatgtgggta
gaccggtatctcactttcatggaggagaggggcacgcctgtggccagtctgccggctgtg
ggcaagaagcccctggacctgttcaggctctatgtctgtgtcaaggagattggaggttta
gcacaggttaataaaaacaagaagtggcgtgagctggcaaccaccttgaacgttggcact
tcgagcagtgcagccagctccctgaaaaaacaatacattcagtacctgttcgccttcgag
tgcaagattgagcgtggggaggaaccccctccagaagtcttcagcactggagatactaag
aaacaacctaagattcagccgccatctcctgctaattccggttccttacaaggcccacag
actccacagtctactggtagtaattccatgacagaagtgccaggtgatttgaagccccca
acaccagcatcaacacctcatggacaaatgacacctatgcagggtggcagaaacagcgca
gtgagcgtgcatgatcccttttctgatgtaagcgattcagcgttcccgaagcgaaactcc
atgacgccaaatgcaccataccagcagggaataaacatgccagatatgatgggaaggatg
ccgtatgagccgaataaagatccatttggtggaatgagaaaagtgcctggaagcaatgag
gctttcatgacccctggacaaatgcccaacagtggaatacaagatatgtataaccagagt
ccatctggagcaatgtccaacatgagcatgagccagcgacagcagttctcttatggaagt
ggctatgacaggaggtcggatcatgggctgggtcctgaaggcagtatgggaccacctggt
caaagcaacatggtgccttcaaacagtgacccaagcatgtactctcctaatcattaccct
ggccatcaaaggcatgaaccatatgggcagcagtatccaggacaaggacctccctcagga
caaccaccgtatggaggacatcaacctggaatgtatccacagcagcagaactataagcga
cacatggatggcatgtatgggcctccagccaaacgccacgaaggggatgtgtataacatg
cagtatggcaaccagcagcaggaaatgtataaccagtacagcaatgcttacactgggccc
gacaggaggcccatgcagggacagtatccatatccatataaccgggagaggatgcagggc
ccaggacaaatgcagcagcatggaatacctccccagatgattggtggccccatgcagtcg
tcatcctccagcgaaggtcctcagcagaacatgtggccaacacgaaatgatatgccttat
ccttaccagaataggcaaggtccaggaggccctgcacaggccccaccgtatccagggatg
aatcgcactgatgatatgatggtacctgaccagagaataaaccacgaaagtcagtggcct
tctcatgtcaaccaacgtcagccttcttatatgtcatcctcagcctccatgcagcctatc
actagacctcctcagtcatcctaccagacaccaccctctatgccaaaccacatttctaga
gctccaagtccagcatccttccagcgctctctggaaaaccgtatgtctccaagcaagtct
cctttcctaccctccatgaagatgcagaaggttatacccacagttccagtgtcacaggtc
acaggacctccaccccagccaccaccaattaggcgcgaaattaccttccccccaggctct
gtagaagcatcgcaaccagtcttaaaaccaagacgaaagattacctcaaaagatattgta
actcctgaggcctggagagtgatgatgtctctcaaatctggtcttttggccgaaagtacc
tgggcgctagacactattaatattcttctgtatgatgacagcaccgttgctactttcaac
ctctctcagttgtctggatttcttgagcttttggtagaatattttagaaaatgcctgatt
gacatttttggaatccttatggaatatgaagtgggagatccaggtcacaaagcacttgat
cacaaagcagccaagaaagatgatagccagtccttggcagaggatactgggaaagaggag
aacgatgaatgtattgactattttgatgaagatgaggaggagggggaggatgaaaaggta
gaaggagaagaaaagagcattgttttttccactcctggtgccattgctgatccaagtgag
aggccaaaacaagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataat
ctgtttgttgttgaccgatctgacaaacttggacgtgttcaggaatttgatagtggactt
ctccactggcagcttggtggtggtgacacgactgagcacatccagactcactttgaaagc
aagatggagattcctccacgcaggaaagcccctcctcccttgaattctccaagcaaaaag
aaggacctcgaggggaaaggtgaatctgaggaacaacaagaaaaaagtataacagctacc
attgatgatgtcctctcagctcggccaggagcattgcctgaagactcaaaccctggttcc
caagcagagagcagtaaatttccctttgggatccatcaagccaaaagccaccggaatatt
aaactgctagaggatgagccaaggagccgggatgagactcctctatgcaccataacccac
tggcaagactccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtct
tttgtgcctggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcctggga
aagttgatccttcttcaccatgagcatccagaaagaaagcgagcgccacagacatatgag
aaagaggaagaggaggacaaaggggtggcctgcagcaaggatgaatggtggtgggactgc
ctcgaggtcttgagggataatacattggtcacattagccaacatttctgggcagctagac
ttgtctgcttacacagaaagcatctgtttgccaattttggatggcttgctgcactggatg
gtgtgcccatctgcagaggcacaggatccttttccaaccgtggggcccaactcagttctt
tcgcctcagagacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtg
gaccttatcttggccacaccccccttcagtcgtcaggagaaactctacgctactttagtt
aggtacgttggggaccgcaaaaacccggtctgccgagaaatgtccatggcgctcttatcg
aaccttgcccagggggacacattagcagcaagggcaatagctgtgcagaagggaagcatc
ggaaacttgataagcttcctggaggatggggtcactatggcccagtaccagcagagccag
cataacctcatgcacatgcagcctccacctctggagccacctagcgtagacatgatgtgc
agggcagccaaggccttgctggccatggctagagtggacgagaaccgctcagagttcctt
ttgcacgagggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgca
tctgtcatctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
