Apteryx rowi (Okarito brown kiwi): 112977040
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Entry
112977040 CDS
T07573
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112977040 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arow03041
]
112977040 (CDC40)
Spliceosome [BR:
arow03041
]
Complex C
Other components
Step II factors
112977040 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
112977040
NCBI-ProteinID:
XP_025944683
Ensembl:
ENSARWG00000015082
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MSAAIAAIASYGGSDSEPDSEPEAEAGPGRAAAAAVVLASRDAVLHLRAPPAAPPALPVD
SAPEVAVKEDVETGVHLDPATKEVQYNPTYDTMFAPEFGPENPFRTQQMAAPRNMLSGYA
EPAHINDFMFEQQRRTFATYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFETGQRKI
EKRKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPG
EEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVR
LFPLSGHILLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDISFNNAGTQFLSAAYDRY
LKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYD
RHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKW
LACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIW
DWKTTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcgatcgccgcgatcgcctcctacggcggttccgactcggagccggactcg
gagcctgaggccgaggcgggcccgggccgcgccgccgccgccgccgtcgtcctggccagc
cgcgacgcggtgctgcacctccgcgcgccccccgccgccccgcccgccctgcccgtcgac
tcggccccggaagtggccgtgaaggaagatgtggaaacaggagtccaccttgatcctgct
accaaggaggttcagtacaatcccacttatgataccatgtttgcacctgagtttggacca
gaaaacccatttaggactcagcaaatggctgcacctagaaatatgctttctggatatgca
gaaccagctcacatcaatgatttcatgtttgaacagcaaagaagaacatttgcaacctat
ggttatgcattagatccctctatagataaccctgaagttgctaccaaatacattggttct
gtagaagaagctgaaaaaaatcaaggtttaacagtgttcgaaacaggacagaggaaaata
gaaaaaaggaagaaattcaaagagaatgatgcatctaacattgatggtttcctgggacca
tgggcaaaatacgttgatgaaaaagaagtagccaaaccctcagaagaagaacagaaagag
ttggatgaaataacagctaagaggcagaagagaggaaaactagaagatgataaacctgga
gaggagaagactatattacatgtcaaggaaatgtatgactatcaggggagatcttatctt
catgtccctcaagacgttggagttaatctccgttctacagtgccacctgagaaatgttat
cttccaaagaaacaaatccatgtatggtctggacatacaaagggtgtcagtgcagttaga
ttgtttcctctctctgggcacatactgttgtcttgctctatggattgcaaaattaaacta
tgggaggtatatggtgatcgaagatgtctacgaacatttattggacacagtaaagctgtt
cgagacatatcttttaataatgctggcactcagtttcttagtgcagcatatgatcgctac
cttaaactctgggacactgaaacagggcaatgtatttcaagattcacaaacaggaaggtt
ccttactgtgtcaaattcaatcctgatgaagataaacaaaatctctttgttgcaggaatg
tcagataagaaaattgtgcagtgggatattcggagtggtgagattgtgcaggaatacgat
aggcatttgggtgctgtcaacaccattgtgtttgtggatgaaaatagacggtttgtgagt
acatctgatgacaagagtctaagagtctgggaatgggatattcctgtagacttcaagtac
atagctgagccaagtatgcactcgatgccagctgtgactttgtctccaaatgggaaatgg
ttggcttgtcagtcaatggataaccaaattctgatttttggagctcagaacagattcaga
ttaaacaaaaagaaaatcttcaaaggtcacatggtagctggctatgcttgtcaagtggat
ttttcacctgacatgagctatgtgatatctggagatgcagatggaaaacttaacatctgg
gactggaagacaacaaaactctacagcaggttaaaagcacatgataaagtctgtattggt
gcagtctggcatccacatgaaacatctaaagtcattacgtgcggctgggatggtcttatt
aaactatgggactaa
DBGET
integrated database retrieval system
