KEGG   Apteryx rowi (Okarito brown kiwi): 112977296
Entry
112977296         CDS       T07573                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
arow  Apteryx rowi (Okarito brown kiwi)
Pathway
arow03013  Nucleocytoplasmic transport
arow03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arow00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112977296 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    112977296 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arow03019]
    112977296 (THOC2)
   03041 Spliceosome [BR:arow03041]
    112977296 (THOC2)
Messenger RNA biogenesis [BR:arow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     112977296 (THOC2)
Spliceosome [BR:arow03041]
 Complex C
  Other components
   EJC/TREX
    112977296 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112977296 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 112977296
NCBI-ProteinID: XP_025945278
Ensembl: ENSARWG00000009440
LinkDB
Position
Unknown
AA seq 1610 aa
MAAAAALPAEWIKNWEKAGKSEFLQLCRTLSENKSHDNMGFRDIQQALYELAYHVVRGNL
KHDQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDT
VLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQ
DLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEP
QTLCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKR
EIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHA
QSIMDQMPPFYATSHKPIAXALCQLVHVTTEPLYRRVGVPKGAKGSPIPSLPNKRAPKQA
DSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTAKKFVSDGVVKFQSDG
SKQEDKEKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQW
KNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQI
QKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCG
AVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGE
QLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVG
KLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHIS
SKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSL
TMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLE
HVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQK
TPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNY
PGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVL
TKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEFH
HKDPPARNAVAATVQNGPGGAGMPASLSINTAKLEESTAEETDKLKEKSQGAVKVINKAV
NATPKVTTSNGNSASNSKIIKEKEDKEKSGKEKEKEKKEKTPAATPETKALGKDGKDKPK
EERANKDDKAREIKEKTPKSDKEKEKAKKEEKTSKEEKMKTVVTNIDSKSAAEKEREKEP
SRERDVAKDMKSKENAKGGEKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSST
VKDNLSELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKR
DHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKGD
SIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq 4833 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggcgctccctgccgagtggataaagaactgggagaaagcgggcaag
agcgagtttttgcaactatgccgcactctcagtgaaaacaaaagccatgataatatgggt
ttcagagatatccagcaggctttgtatgagcttgcatatcacgttgtcagaggaaaccta
aaacatgatcaagcttctaatgttcttggtgatgttatagaatttcgggaagacatgccc
tccattttagctgatgtgttctgcatattagatattgaaacaagttgtttagaagaaaaa
agtaagagggatcattttacccaattggtattagcctgtttgtatcttgtatctgacact
gtcctaaaggagcgtttagatccagaaacactggagtcgttaggacttatcaagcagtct
caacagttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacagaag
tttaatttgttaagagaggagaatgaaggttatgcgaagctgattgcagaactggggcaa
gacttatctggaaatatcactagtgatttaattcttgaaaatatcaaatctttaatagga
tgttttaaccttgatcctaacagagttttggatattatcctagaagtctatgagtgcagg
cctgagtatgatgatttctttgtaccattgatagagtcctacatgtacatgtgtgaacct
caaactctctgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgag
acaccttcctccttatacagagttgctgctgtccttttgcaacacaatctcattgatttg
gaagatctttatgttcaccttcttccaggggataatgccatcatcgaggaacacaagcgg
gagatagtagaagctaagcaaattgtcagaaaacttacaatggttgtcttgtcctctgaa
aagactgaagaaaaagagaaggaaaaagaaaaggaggaggagaaaactgaaaagccacct
gataatcaaaagcttggtttattggaagctttattaaaaattggtgattggcagcatgca
caaagcattatggatcagatgcctccattttatgctacttcacacaagcccattgcartt
gccctttgccagcttgtacatgtgacaactgaacctctgtatcgcagggttggagtacct
aaaggggctaaagggtcaccgattccttctttgccaaacaagagagcaccaaaacaagca
gacagttttgaagacttgagaaaggaagtgttcaacatgctttgttaccttggtcctcat
ctttcccatgatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatgaaa
gaggttggaactgcgaagaaattcgtcagtgacggagtggttaagtttcagtctgatgga
agcaaacaagaagataaagagaaaatggagatcttatttagctgtttgttgagtattacc
gatcaagtattgcttccatctctttctttgatggactgcaatgcatgcatgtctgaagaa
ctgtggggaatgttcaaaacttttccataccagtaccggtatcgtctttatggacagtgg
aagaacgaaacatacaatagtcacccacttctagtgaaagttaaagctcaaaccatagac
cgagccaaatatatcatgaagcgtctaacaaaggaaaatgtgaaaccctctggaagacaa
attggaaaactcagccacagcaatcctacaattttatttgattatattttatcacaaata
cagaagtatgataacttaataactccagttgttgattcactgaaatacctcacttcactg
aattacgatgtcttggcatactgtattattgaagctctggcaaatcccgagaaggagaga
atgaagcatgatgacaccacaatctcaagctggttgcagagtctggctagcttttgtggt
gcagttttccgaaaatacccaattgaacttgctggtttacttcaatatgtagcaaaccaa
ctgaaagctgggaaaagctttgatttgcttattttaaaagaggtagtacaaaaaatggct
ggtatagaaattactgaagaaatgacaatggaacagttggaagccatgactggtggagaa
cagctaaaagctgagggtggatactttggccaaatcaggaacacaaaaaaatcttctcag
agattgaaggatgcattattggaccatgatcttgcccttccactgtgcctgcttatggct
caacagagaaatggtgtgatctttcaagagggaggggaaaaacatctgaagcttgtgggg
aaactgtatgatcagtgccatgataccctggtacaatttggtggatttttagcatccaat
ctaagcacggaggattacattaagcgagtgccttctattgatgttctctgtaatgagttt
cacacacctcatgatgctgcatttttcctttcaagacccatgtatgcacaccatatttca
tcaaagtatgatgaactaaaaaaagctgagaagggaaataaacagcagcacaaagttcac
aaatacattacatcgtgtgagctggtgatggctcctgttcatgatgctgtgatctctctg
caccttcccaaggtttgggatgacatcagtcctcagttttatgctacattctggtctctg
acaatgtatgaccttgctgtcccacatagtagctatgacagagaagtcaataaacttaaa
gtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaagaaagaa
aaagaacgttgtacagctcttcaggacaagcttcttgaagaggagaagaaacaattggag
catgtgcaaagggttctgcagagactgaaactggagaaggacaactggcttctggcaaag
tctaccaaaaatgagactatcacaaaatttctgcagttgtgtatatttcctcgctgcatt
ttttcggcaatcgatgcggtttattgtgctcactttgtagaactggtgcatcagcagaaa
acacccaacttctcgacacttctctgttatgatagagttttctctgatattatatataca
gtagcaagttgcactgaaaatgaagctagtagatatggcaggtttttatgctgtatgttg
gagaccgtgactagatggcacagtgacagagtcatatatgaaaaggaatgtggcaactat
ccaggcttcctcactatattacgggcaactggatttgatggtggaaataaagctgatcag
ttggattatgagaattttagacatgtggtacacaaatggcattataagttaactaaggct
tctgtacactgccttgaaacaggtgaatatacacatatcagaaatatcctgattgtgctg
accaaaatccttccgtggtatccaaaagtattgaacctgggccaagccttggaaagaaga
gtacataagatatgtcaggaagagaaagagaagagacctgatctatatgcattggctatg
ggctattctgggcagttgaaaagtaggaagccttacatggtacctgaaaatgaattccac
cacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggtggt
gctgggatgcctgcatctctctcaataaatacagctaaactggaagaaagcactgctgag
gagactgataaactaaaggagaaatctcagggtgctgtgaaagttattaataaagctgtc
aatgctacaccaaaggtgacaacaagcaatggaaacagtgcttctaatagcaaaattatt
aaagaaaaagaggataaagaaaaaagtgggaaggaaaaagagaaagaaaaaaaggaaaag
actccagctgccactccagagaccaaggcacttgggaaggatggaaaagataaaccaaag
gaagaacgggcaaataaagatgataaagcaagagagatcaaggagaagacaccaaaatct
gacaaagagaaggaaaaagccaagaaagaagaaaaaacttcaaaagaagaaaaaatgaag
acagttgttaccaacattgattcaaaatcagctgcagaaaaggagagagaaaaggagccg
tccagagaaagagatgtagcgaaggatatgaaatccaaggaaaatgctaaaggaggagaa
aagatgccagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagaatct
gaaagggaacaaaaacgccgcaaagttgatacccattcttctccatcacattcctcaaca
gtaaaggacaacctcagcgaactcaaggactcttcagcaaagcactacattaaccacact
actccaacactgtccaagagtaaggagagagaagtggacaagaaagatttggacaagtca
agggaaagatcaagagagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagg
gatcattcaaacagtgaccgggaggtgccacaggattcaactaaacgacgcaaagaggaa
aatgggacaactggttcttcaaaacatagtaaaagtgaaagtccttctgattcccctcgc
tcaaatgaaaaggaaaaggagaagaacaaatcaaaatcttcaggtaaagaaaaaggtgat
tcaatcaaagcagagaagatggagaagagctcctctggtagcaaaaaggaatcaagacat
gataaagaaaaaacagaaaagaaagaaaaacgagacagcactggaggaaaagaagaaaag
aaacatcataaatcttcagacaagcacagataa

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