Apteryx rowi (Okarito brown kiwi): 112977296
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Entry
112977296 CDS
T07573
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03013
Nucleocytoplasmic transport
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112977296 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
112977296 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112977296 (THOC2)
03041 Spliceosome [BR:
arow03041
]
112977296 (THOC2)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112977296 (THOC2)
Spliceosome [BR:
arow03041
]
Complex C
Other components
EJC/TREX
112977296 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112977296 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
112977296
NCBI-ProteinID:
XP_025945278
Ensembl:
ENSARWG00000009440
LinkDB
All DBs
Position
Unknown
AA seq
1610 aa
AA seq
DB search
MAAAAALPAEWIKNWEKAGKSEFLQLCRTLSENKSHDNMGFRDIQQALYELAYHVVRGNL
KHDQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDT
VLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQ
DLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEP
QTLCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKR
EIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHA
QSIMDQMPPFYATSHKPIAXALCQLVHVTTEPLYRRVGVPKGAKGSPIPSLPNKRAPKQA
DSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTAKKFVSDGVVKFQSDG
SKQEDKEKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQW
KNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQI
QKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCG
AVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGE
QLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVG
KLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHIS
SKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSL
TMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLE
HVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQK
TPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNY
PGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVL
TKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEFH
HKDPPARNAVAATVQNGPGGAGMPASLSINTAKLEESTAEETDKLKEKSQGAVKVINKAV
NATPKVTTSNGNSASNSKIIKEKEDKEKSGKEKEKEKKEKTPAATPETKALGKDGKDKPK
EERANKDDKAREIKEKTPKSDKEKEKAKKEEKTSKEEKMKTVVTNIDSKSAAEKEREKEP
SRERDVAKDMKSKENAKGGEKMPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSST
VKDNLSELKDSSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKDEKDRKDRKR
DHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEKGD
SIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcgctccctgccgagtggataaagaactgggagaaagcgggcaag
agcgagtttttgcaactatgccgcactctcagtgaaaacaaaagccatgataatatgggt
ttcagagatatccagcaggctttgtatgagcttgcatatcacgttgtcagaggaaaccta
aaacatgatcaagcttctaatgttcttggtgatgttatagaatttcgggaagacatgccc
tccattttagctgatgtgttctgcatattagatattgaaacaagttgtttagaagaaaaa
agtaagagggatcattttacccaattggtattagcctgtttgtatcttgtatctgacact
gtcctaaaggagcgtttagatccagaaacactggagtcgttaggacttatcaagcagtct
caacagttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacagaag
tttaatttgttaagagaggagaatgaaggttatgcgaagctgattgcagaactggggcaa
gacttatctggaaatatcactagtgatttaattcttgaaaatatcaaatctttaatagga
tgttttaaccttgatcctaacagagttttggatattatcctagaagtctatgagtgcagg
cctgagtatgatgatttctttgtaccattgatagagtcctacatgtacatgtgtgaacct
caaactctctgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgag
acaccttcctccttatacagagttgctgctgtccttttgcaacacaatctcattgatttg
gaagatctttatgttcaccttcttccaggggataatgccatcatcgaggaacacaagcgg
gagatagtagaagctaagcaaattgtcagaaaacttacaatggttgtcttgtcctctgaa
aagactgaagaaaaagagaaggaaaaagaaaaggaggaggagaaaactgaaaagccacct
gataatcaaaagcttggtttattggaagctttattaaaaattggtgattggcagcatgca
caaagcattatggatcagatgcctccattttatgctacttcacacaagcccattgcartt
gccctttgccagcttgtacatgtgacaactgaacctctgtatcgcagggttggagtacct
aaaggggctaaagggtcaccgattccttctttgccaaacaagagagcaccaaaacaagca
gacagttttgaagacttgagaaaggaagtgttcaacatgctttgttaccttggtcctcat
ctttcccatgatcccattttatttgcaaaagtggtgcgccttggaaaagcatttatgaaa
gaggttggaactgcgaagaaattcgtcagtgacggagtggttaagtttcagtctgatgga
agcaaacaagaagataaagagaaaatggagatcttatttagctgtttgttgagtattacc
gatcaagtattgcttccatctctttctttgatggactgcaatgcatgcatgtctgaagaa
ctgtggggaatgttcaaaacttttccataccagtaccggtatcgtctttatggacagtgg
aagaacgaaacatacaatagtcacccacttctagtgaaagttaaagctcaaaccatagac
cgagccaaatatatcatgaagcgtctaacaaaggaaaatgtgaaaccctctggaagacaa
attggaaaactcagccacagcaatcctacaattttatttgattatattttatcacaaata
cagaagtatgataacttaataactccagttgttgattcactgaaatacctcacttcactg
aattacgatgtcttggcatactgtattattgaagctctggcaaatcccgagaaggagaga
atgaagcatgatgacaccacaatctcaagctggttgcagagtctggctagcttttgtggt
gcagttttccgaaaatacccaattgaacttgctggtttacttcaatatgtagcaaaccaa
ctgaaagctgggaaaagctttgatttgcttattttaaaagaggtagtacaaaaaatggct
ggtatagaaattactgaagaaatgacaatggaacagttggaagccatgactggtggagaa
cagctaaaagctgagggtggatactttggccaaatcaggaacacaaaaaaatcttctcag
agattgaaggatgcattattggaccatgatcttgcccttccactgtgcctgcttatggct
caacagagaaatggtgtgatctttcaagagggaggggaaaaacatctgaagcttgtgggg
aaactgtatgatcagtgccatgataccctggtacaatttggtggatttttagcatccaat
ctaagcacggaggattacattaagcgagtgccttctattgatgttctctgtaatgagttt
cacacacctcatgatgctgcatttttcctttcaagacccatgtatgcacaccatatttca
tcaaagtatgatgaactaaaaaaagctgagaagggaaataaacagcagcacaaagttcac
aaatacattacatcgtgtgagctggtgatggctcctgttcatgatgctgtgatctctctg
caccttcccaaggtttgggatgacatcagtcctcagttttatgctacattctggtctctg
acaatgtatgaccttgctgtcccacatagtagctatgacagagaagtcaataaacttaaa
gtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaagaagaaagaa
aaagaacgttgtacagctcttcaggacaagcttcttgaagaggagaagaaacaattggag
catgtgcaaagggttctgcagagactgaaactggagaaggacaactggcttctggcaaag
tctaccaaaaatgagactatcacaaaatttctgcagttgtgtatatttcctcgctgcatt
ttttcggcaatcgatgcggtttattgtgctcactttgtagaactggtgcatcagcagaaa
acacccaacttctcgacacttctctgttatgatagagttttctctgatattatatataca
gtagcaagttgcactgaaaatgaagctagtagatatggcaggtttttatgctgtatgttg
gagaccgtgactagatggcacagtgacagagtcatatatgaaaaggaatgtggcaactat
ccaggcttcctcactatattacgggcaactggatttgatggtggaaataaagctgatcag
ttggattatgagaattttagacatgtggtacacaaatggcattataagttaactaaggct
tctgtacactgccttgaaacaggtgaatatacacatatcagaaatatcctgattgtgctg
accaaaatccttccgtggtatccaaaagtattgaacctgggccaagccttggaaagaaga
gtacataagatatgtcaggaagagaaagagaagagacctgatctatatgcattggctatg
ggctattctgggcagttgaaaagtaggaagccttacatggtacctgaaaatgaattccac
cacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaatgggccaggtggt
gctgggatgcctgcatctctctcaataaatacagctaaactggaagaaagcactgctgag
gagactgataaactaaaggagaaatctcagggtgctgtgaaagttattaataaagctgtc
aatgctacaccaaaggtgacaacaagcaatggaaacagtgcttctaatagcaaaattatt
aaagaaaaagaggataaagaaaaaagtgggaaggaaaaagagaaagaaaaaaaggaaaag
actccagctgccactccagagaccaaggcacttgggaaggatggaaaagataaaccaaag
gaagaacgggcaaataaagatgataaagcaagagagatcaaggagaagacaccaaaatct
gacaaagagaaggaaaaagccaagaaagaagaaaaaacttcaaaagaagaaaaaatgaag
acagttgttaccaacattgattcaaaatcagctgcagaaaaggagagagaaaaggagccg
tccagagaaagagatgtagcgaaggatatgaaatccaaggaaaatgctaaaggaggagaa
aagatgccagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagaatct
gaaagggaacaaaaacgccgcaaagttgatacccattcttctccatcacattcctcaaca
gtaaaggacaacctcagcgaactcaaggactcttcagcaaagcactacattaaccacact
actccaacactgtccaagagtaaggagagagaagtggacaagaaagatttggacaagtca
agggaaagatcaagagagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagg
gatcattcaaacagtgaccgggaggtgccacaggattcaactaaacgacgcaaagaggaa
aatgggacaactggttcttcaaaacatagtaaaagtgaaagtccttctgattcccctcgc
tcaaatgaaaaggaaaaggagaagaacaaatcaaaatcttcaggtaaagaaaaaggtgat
tcaatcaaagcagagaagatggagaagagctcctctggtagcaaaaaggaatcaagacat
gataaagaaaaaacagaaaagaaagaaaaacgagacagcactggaggaaaagaagaaaag
aaacatcataaatcttcagacaagcacagataa
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integrated database retrieval system