Apteryx rowi (Okarito brown kiwi): 112977392
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Entry
112977392 CDS
T07573
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112977392 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arow03021
]
112977392 (TAF4)
03036 Chromosome and associated proteins [BR:
arow03036
]
112977392 (TAF4)
Transcription machinery [BR:
arow03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112977392 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
112977392 (TAF4)
Chromosome and associated proteins [BR:
arow03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
112977392 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
112977392
NCBI-ProteinID:
XP_025945542
Ensembl:
ENSARWG00000009621
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANVQTESSSSSKMGLSAPEITKAGAGGVQGGVINHNTR
SQSSTLDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPASAPAVAPLVNNGPGSVGKGNTVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSIGSGGPTVTLVRPPIHPAGPTVAAAGAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSSVPAAPATQVIKSESPKT
IVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLSNVAPNPGGISPAAPGTPTGMAKGTA
NTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTALGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEAEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVMLSPSVQRT
AGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKTGALIRPPQVTLTQTPM
VALRQPHSRIMLTTPQQIQLNQLQTVPVVKPTVLPGNKAIATVSTQVAAAQKNKLKEPGG
GSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFSAPLQRRILEI
GKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQKNISYKDDERYEQASDVRAQLK
FFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDAN
LTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGIGTTRQFTRQRITRVNLRDLIF
CLENERETSHSLLLYKAFLK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccctagccctggaggagtagtagtagga
ggcaatgctaatgtccaaacagagagcagcagcagcagcaagatgggactcagtgcccca
gagatcacaaaagcaggagcaggaggagtgcaaggaggcgttattaatcataacaccagg
tcccagagttcaactctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggatctgaagttactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcacgatggcaactgccttgtccaccaggaatggcaagattgggaccacaacagtg
caaactttgaatgggagtaatgtggtgatgaactctcaccacacaggaagtgctgctttc
tccgggactcccgtgactgctaacccggcttctgcacctgctgttgcccctctagttaac
aatggacctggatctgtcggaaaaggaaatactgttaatgctgttttgccgtcagcttcc
aacactgtcatccagacttctttccttaatactgctgtgtcgtctgcatcttcttcctca
cccacagttatttcctcgcagccaccaccgagcattggaagtggggggcctacggtaaca
cttgtgaggccaccaattcaccctgcaggacccacagtagctgcagctggtgcagccact
caaaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gctacagccactgtgggatctggagtttccctccagacatcacttgtgaacagccagtct
ggttccagtgtgccagcagctcccgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtatcccaacagcagacgctggctactggtggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctggcctctccaatgttgctcccaat
cctggtgggatatctcctgcagctcctggcacccccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccaaggactccaacagcaactacgagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccaactaat
attcagaattttcagttaccaccaggcatggtccttgtgcgtagcgagaatggacagttg
ctgatgatccctcagcaagccttggcgcagatgcaagcgcaggcacatgcccagtctcag
cctcaaaatactatgactcctcgtcctgctacacctaccagtgcacctccagtacagata
tcaacagtgcaggctccaggaacgcctattattgcgcgacaggtgacaccaactactatt
atcaagcaagtgtctcaggctcaaacgacagtgcaacccaccacaacgctacagcgtcct
cctgttgtgcaacctcagattgttctgggtggtactgcacagacgactgcgttggggaca
gcaacggctgtacaaactggaactccgcagagaaccgtgcaaggaacaacggcaacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtctacatta
ataaaactggcatcatctggaaaacagtcctcagaaactgcggctaacgtgaaagaattg
gtacagaacctgctggacggaaaaattgaagcagaagactttaccagtagactgtacaga
gagcttaattcttcacctcaaccttaccttgtgccttttctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcaaagtcaacagcaacagccc
acaacgcaagcaacaactgcacttacggcggtgatgctaagcccctcagttcagcgcaca
gcagggaaggccacggcaactgtaacgagtactctccaacaacctgtaatcagcctaact
cagcctacgcaagttggcgttagcaaacaagggcagtctacaccactggttatccaacag
tctcaaaaaacaggggcattgataaggcctccacaggtgacgttgacacagacaccaatg
gtagcactgcggcaaccacatagtcgtattatgcttactactcctcaacaaattcaattg
aatcaacttcagacagtacctgtggtaaaaccaacagtattacctggaaacaaagctatt
gccactgtttcaacacaagtagctgctgctcagaaaaataaactgaaagagcctggggga
ggttcttttagggatgacgatgacatcaatgatgttgcatcgatggccggagtcaaccta
tcagaggaaagtgctcggatattggcaacaaactctgagctagtgggcacgttaacaagg
tcctgtaaagatgaaaccttcctcttctcagcacctttacaaagaaggatattagaaata
ggtaaaaaacatggaataacagaaatccatcctgatgtagttagctatgtatcacatgct
acgcagcagagactacaaaacctygtggaaaaattatcggagactgctcaacaaaagaac
atttcttacaaggatgatgaaagatatgaacaagcaagtgacgttcgagcacagctcaag
ttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaaagggaaatt
ttaatgcgtgcagcaaagtctcgatctagacaagaagatccagagcagcttaggttgaaa
cagaaggccaaggagatgcagcaacaggagctagcacagatgagacagagggatgccaac
ttgactgcgttagctgcaatcggtcccagaaagaaaaggaaagtggattcaccaggctct
ggatcagggacagagggatctggttcaagtgcagcagtcccaggcagctctggaattgga
acaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggacctcatattt
tgtttagaaaatgagcgagagacaagccattcactattgctatataaagcattccttaag
taa
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integrated database retrieval system
