Apteryx rowi (Okarito brown kiwi): 112977577
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Entry
112977577 CDS
T07573
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112977577 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112977577 (CNOT6L)
Enzymes [BR:
arow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112977577 (CNOT6L)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112977577 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112977577 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
112977577
NCBI-ProteinID:
XP_025945854
Ensembl:
ENSARWG00000003092
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASMKSLHVDKQLLIVANAHMHWDPE
YSDVKLIQTMMFVSELKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNG
IVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKG
VIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPLLPLV
NGVHLPSRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttacaccatcatgtcagcc
gaagaggtagccaatgggaagaagtctcactgggccgaattagagatctcgggtagagtg
cggagcytaagtacgtccctttggtcgctgacgcacttgacggctctacacctcaatgac
aataatcttactcgcattccgcctgatattgccaagcttcataatctggtttacctggat
ctgtcatccaacaaactcagaagtttaccagcagaactaggaaacatggtatctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctcttc
cagctacaaaccctaggtttgaaaggcaatcctttatcacaagatattctcagcctctac
caggatccagatggaactcgaaagctactgaactacatgcttgacaatctagcagttcat
ccagagcagctgcctccaaggccatggattactttaaaagaacgagaccaaattctgccc
tcagcttcgttcacagttatgtgttacaatgtgttgtgtgataaatatgccacccggcag
ctctatggctactgcccatcttgggcaytgaactgggagtacagaaaaaagggaatcatg
gaagaaatagtcaactgtgatgcagatatcattagtcttcaggaagtggaaacagagcaa
tacttcaccctttttctgccagccttgaaagaacgaggatacgacggattcttttctcca
aagtcacgtgccaaaatcatgtctgagcaggagaaaaagcatgtggatggctgtgcaata
ttcttcaaaacagaaaaatttaccctggtgcagaagcatacagtggagttcaatcaggtg
gcaatggcaaactccgaaggttcagaagctatgttaaacagagtgatgacgaaggacaac
attggagttgctgtggtgttagaagtgcacaaagaattatttggagcaagtatgaaatca
cttcatgtggacaaacagctgctcattgtggccaatgcccacatgcactgggaccctgaa
tactcagatgtgaaactcattcagactatgatgtttgtctcagaactgaaaaatatcctt
gagaaagcctcaagcaggcctggtagcccaacagcagatcctaattctatccctctggtg
ctgtgtgcagatcttaactcactgcctgattcaggtgtagtggaatacctaagcaatggc
atagtagctgacaaccacaaggacttcaaagagttgcgttacaacgagtgtctcatgaac
ttcagtggcaatgggaaaaacggggcttctgaaggaagaattacgcatggcttccaactc
aagagcgcttatgaaaacaacttgatgccttacaccaattacacttttgatttcaaaggt
gtgattgactacattttctattccaacactcacatgaacgtgcttggtgtcctggggcct
ttggaccctcagtggctggttgagaacaacatcactgggtgtccacaccctcacatccct
tcagaccacttctcactgttaacacaactcgaactccatcctccgctcctgcctcttgtc
aacggtgttcacttgcccagcaggaggtag
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