Apteryx rowi (Okarito brown kiwi): 112977612
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Entry
112977612 CDS
T07573
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112977612 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112977612 (HERC3)
Enzymes [BR:
arow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112977612 (HERC3)
Ubiquitin system [BR:
arow04121
]
Ubiquitin ligases (E3)
HECT type E3
112977612 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
112977612
NCBI-ProteinID:
XP_025945904
Ensembl:
ENSARWG00000003109
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MQLLSQLWRLGRIKLHDLLKREKMLCWGYSSFGQPGIGSNLRVIIPEPQVYGFIRDRNVK
EVACGGNHSIFLLEDGEVYTCGLNTKGQLGHESEGSKPEQIGALAGQHIVHVACGESHSV
ALSDQGQLFSWGAGGDGQLGLTTVEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ
FFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKN
SSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD
SMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKC
PSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETH
YTCLINDETLDVWRQKLLEKNSSNSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPG
IDLNSTRVLFEKLMNSQHSILLDQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPLFQ
DSKYYITLTLPLAMAILRLDTNPSKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTL
LIPVLFSSYITAALRLLEKLHKVNQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGM
KVRPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLV
RSPFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKE
LLNPIYGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKL
LNVKPCLEDLKELSPTEGRSLQQLLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGD
KILVQKDNKEEFVEAYVNYIFNLSIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGN
NNYNWEELEESAVYKGDYTATHPTVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSS
LRIVIQSTASSEQYLPVAHTCYNLLDLPKYSSKEILSARLIQAIDHYEGFSLA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgctgtcacagctatggcgtttgggaaggataaagctacatgacttgctgaaa
agagagaaaatgctatgctggggatactcgtcttttggacagcctgggataggtagcaac
ctccgggtcatcattcctgaaccgcaggtatatggcttcattcgtgacagaaatgtcaag
gaggtggcgtgtggaggaaaccattctatcttcttgctggaagatggggaagtgtatacc
tgcggcttgaacaccaaaggccaactggggcatgagagtgaaggaagcaagccagaacaa
attggagcactggcagggcagcacatagtgcacgtggcctgcggagagtctcacagtgtg
gcactcagcgaccagggccagctcttctcctggggcgcgggcggygatggacagttgggc
ctcactactgtagaagacgcagtgacagtaccaaggttgataaagaaattgaaccaacag
acgatactgcaggtttcctgtggaaattggcattgcctggctttggcagcagatggccag
ttcttcacgtgggggcagaacagctatggtcagctgggtttgggtaaagaatgtccctcc
caagccagtccacaacgtgtcaaatctcttgatgggatccctttggctcaggttgctgca
ggcggagctcacagctttgccctgtctctctcaggagctgtgtttggctgggggaagaac
agctcagggcagctgggattaagtgatgaacgagaccgagaatctccttgccatgtgaag
ctgttgcggtctcagaaggttgtttacatcagctgtggagaagaacacacagcggttctg
acaaagagtggaggggtgttcacgttcggtgcaggttcctgtgggcaactgggacatgac
tccatgaatgacgaagtgaacccccgaagagttcttgagctaatgggcagcgaagtatcc
cagatcgcttgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctat
gcatttggctgtggaacaagaggccagctaggaactgggcacacatgcaatgttaagtgt
ccctctcctgtgaagggtcactgggcagctcacaatgggcaactctcagggaaacctgat
gcttgtaaatatcacattgttaaacatatcttctctggaggagaccaaacatttgtgctt
tgctccaaatatgagaattccttgcctgctgatgatttccggaccataaatgaaacacat
tacacctgtttaataaatgatgaaactctagatgtctggaggcaaaagcttttagaaaag
aacagttctaattctgtcaataatgtagttcagatactgtcctcggctgcctgctggaat
ggaagcttcctggagaagaaaattgatgaacattttaagaccagtccgaagatcccgggg
attgatttgaactccaccagagtgctgtttgagaagctgatgaattctcagcactccatt
ctcctagaccagatattaaagagctttgaaagctttttgattcctcagctgtccagctcg
ccaccagatgttgaggcaatgaggatctatttgattctgcctgaattcccactcttccaa
gactcaaagtattatataacgttaacacttcctctagcaatggctattctgcgcctggat
accaaccccagcaaagttcttgataactggtggtctcaagtgtgcccaaggtatttcctg
aggctagtggacctctataaaggggcagtggtatacctcctcagtggaagaaagacactg
ttgatcccggtcctgttcagtagctacattacagctgctctcagacttctggagaaactc
cacaaggtaaatcagaaggttaaacacgtagaatatgataagttttatatccctgagatt
tccagcttggtggacattcaggaggattatctcatgtggttcttgcatcaggctggaatg
aaagtaagaccatctatcatgcaggacgctgtgacactctgttcttatcctttcatcttc
gatgctcaggctaagaccaagatgttacagacagatgctgaactacagatgcaggtggca
ataaatggtgcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggtc
agaagccctttyctggtacttcatgtccgcaggagtaacttggttggtgatgctttgagg
gagctgagcatccattcagacattgatttgaaaaagcctcttaaagtcatctttgatggt
gaggaagctgttgacgctggaggggtgacaaaggaatttttcctcctattgttaaaagaa
ctgctcaaccccatctatggcatgttcacttactacccagagtcaaacctgctgtggttt
tcagacacgtgttttgtagaacacaactggtttcacttgattggcatcatatgcggtctt
gcaatatacaacttcaccgtggtagacctgcactttcccttggctctgtacaaaaagctc
ttgaatgtgaagccgtgcctagaggatttgaaggagctgtcccctacagaaggaaggagc
cttcagcagcttttagattaccctggggaagatgtagaagagacgttctgcttgaatttt
acaatctgcagggaaagctatggtgtgacggagcagaagaacctgattgaagatggagac
aaaattctggtgcagaaggataataaggaagaatttgttgaagcctacgtgaattacatc
ttcaacctctccatccatgagtggtacacggccttttccactggcttcctgaaagtgtgt
ggtgggaaagtcctggaactcttccagcccacagagctcagggccatgatagttggaaac
aataactacaactgggaggaactggaggagagtgctgtctataaaggagactacactgcg
acacacccaactgtgagaatgttttgggaaacctttcatgcatttcccttggaaaagaag
aagaaatttctcttgtttctgacgggcagcgaccgcatcccaatctacggtatgtcgagc
ctgcgcatcgtcatccagtccactgccagcagtgagcagtacctgcctgtggctcacacc
tgctataaccttctggacctgcccaagtacagcagcaaggagatcctcagcgctcggctc
atccaagccatcgatcactaygagggctttagcttagcttga
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integrated database retrieval system
