Apteryx rowi (Okarito brown kiwi): 112978076
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Entry
112978076 CDS
T07573
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03013
Nucleocytoplasmic transport
arow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112978076 (UPF2)
03015 mRNA surveillance pathway
112978076 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112978076 (UPF2)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112978076 (UPF2)
mRNA cycle factors
P-body specific factors
112978076 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
112978076
NCBI-ProteinID:
XP_025946965
Ensembl:
ENSARWG00000001170
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MPAERKKPASMEEKESSLNNKEKEFSERRPVSAREKPKDDVKXGMKRETLKVPEDKKKKL
EEEKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEVKRQQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNERCSQSKDSSKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPMELDCGDEAE
DLTKKLLDEQGKREGADSTGAENSDGKQAERKQEDEEASTGSHLKLIVDAFLQQLPNCVN
RDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDL
CSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHHI
EMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPA
EKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKDYVICCMINIWNVK
YNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYN
YRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKR
KLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEEAIRQV
QDLEREFLIKLGLVNDKDSKDSLTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEG
SDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDKM
MLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNK
QQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPA
PANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgaaaaaagccagccagtatggaagaaaaagaatcttcgttaaataat
aaagaaaaagagtttagtgaaaggcgaccagtgagcgctagggaaaagccaaaagacgat
gtcaagrttggaatgaagagagagactttaaaggttcctgaagataaaaagaaaaaactg
gaagaggaaaaaaggaaaaaagaagacaaggagcggaagaaaaaagaggaggataaagta
aaggctgaagaagagcaaaagaagaaagaagaagaagaaaaaaagaaacttgaagaggaa
gagaaaaagaagcaagaagaggaagttaaacgtcaacaggaggaagcagctgctcaactc
aaagaaaaagaggaagcacatcagctccatcaggaggcttgggaacgccatcaagcaaga
aaagaacttcgtagcaaaaaccagaatgcaccagacaatcgccctgaggaaaacttcttt
agcagactggactccagtctgaagaagaacacagcttttgttaagaagctaaaaacgatc
acagagcaacagagggactccttgtcccatgattttaatagcctaaatttaagcaaatac
attgcagaagcagtagcttctattgtggaagctaaactgaaaatatcggatgtgaactgt
gctgtgcacttgtgttccctctttcaccagcgctatgctgattttgctccttcattactt
caggcttggaaaaaacattttgaagcaaggaaagaggagaagactcccaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggatcttcactgacaag
gaaggtctgtctttaatctatgagcagcttaaaaatattattaacgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgatattgctggt
ttggtaccaaggaaagtaaaaactgctgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcatccttcactccaaaggagagctgagcgaagatcggcacaagcaatatgaggaa
tttgcaatgtcctatcagaagctgttggcaaattctcagtctctggctgatcttttggat
gaaaatatgcctgaccttccccaagacaaaccaacacctgaggagcatgggcctggtatt
gacattttcacaccaggcaagcctggagaatatgacctggaggggggtatctgggaagac
gaagatgctagaaatttttatgagaatctcattgacttaaaggcttttgtgccagcaatt
ttgtttaaagataatgaaagatgttcccagagcaaggattccagcaaggatgagtcaaga
gattcaaaagatgccaaagataataaggaagcacctgggagtgaagatttggagttggag
ctggagaacttggatattaatgatgatcccatggagttagactgtggagatgaggcagaa
gatcttacaaaaaaacttctcgatgaacaaggcaagagagagggagcagatagcaccgga
gctgaaaatagtgacggaaaacaagctgaaagaaaacaagaggatgaagaagccagtact
ggatctcatttaaaacttatagtagatgcttttcttcagcagcttccaaactgtgtgaac
agagacctcatagacaaggcagcaatggatttttgcatgaatatgaatacaaaagccaac
agaagaaaattagtacgagcacttttcatagttcctagacaaaggttggatttgctaccg
ttttatgcaaggctggttgccacgttgcatccctgtatgtctgatgtagcagaggatctt
tgttccatgctgagaggggatttcagatttcatgtgagaaaaaaggaccagatcaatatt
gaaacaaagaataaaactgtgagatttattggtgagcttaccaaatttaagatgttctcc
aaaaacgatactctccactgtttaaagatgcttctgtcagacttttctcatcaccacatt
gaaatggcgtgtactctgttggaaacctgtggaagattcctgtttagatcaccagaatcc
cacttaagaaccagtgttcttttggagcaaatgatgagaaaaaaacaagcaatgcatctt
gatgcacgctatgttacaatggtggaaaatgcctactactactgtaatccccctccagct
gaaaaaactgtgaagaaaaaacgtcctcccttgcaggagtatattcgtaagcttctttac
aaggatctctccaaggtcaccacagagaaggtcctgagacagatgcgcaagctgccttgg
caggatgcagaagtaaaagactatgttatatgctgtatgattaacatctggaatgtgaaa
tataatagtattcactgtgtagccaacctcttagctgggttggtcctttaccaggaagat
gttgggattcatgttgtggatggagtgctagaggatattcgactaggaatggaggttaac
cagccaaagtttaaccaacggcggatcagcagtgccaagtttttgggggagctttacaat
taccgaatggtagaatcagctgtaatatttcgaactctatattcattcacatcatttggt
gtgaaccctgatggtagtcctagtccattggatcctccagagcatcttttcaggattaga
ctagtctgtaccatccttgatacctgtggacagtattttgacagaggatccagcaaacga
aaacttgattgcttccttgtatactttcagcggtatgtttggtggaaaaaaagtttggat
gtgtggacaaaagaccatccatttcctatagacattgactatatgatcagtgataccctg
gaactgctgagaccaaagataaagctctgcaattctctggaagaagctatcagacaggtt
caagacttggaacgagaattcttaataaaattaggacttgtgaatgacaaagattccaaa
gattcccttacagaaggagagaatctagaagaggatgaagaggaagaagaaggtggagca
gagacagaggaacaatctggcaatgaaagtgaagtaaatgaaccagaggaagaggagggc
tctgacaatgaggaagaagagggtgaagaagaagaggaagaaaacactgattatcttaca
gactccaataaggaaaatgaaacagatgaggagaatacagaagtaatgattaaaggagga
ggactcaagcatgtcccttgtgcagaagatgaagacttcattcaggcattagataaaatg
atgctggaaaatcttcagcaaaggagtggagaatctgttaaagtgcatcagttggatgtt
gctattcctctgcatctcaaaagtcagctaaagaagggtcccccacttggaggtggggaa
ggagaatcggagtccggagacacaatgccgtttgtcatgttaacacgaaaaggcaacaag
cagcagtttaagatcctgaatgtaccaatgtcttcccaacttgctgcaaaccattggaac
caacaacaagctgaacaggaggaaagaatgaggatgaaaaagctcactttggatatcaat
gaacggcaagaacaagaggactaccaagagatgttgcagtctctggcacagcgtccagct
cctgcgaatactaatcgtgagcggcggcctcgttaccagcatccgaagggagcacctaat
gcagatctaatctttaaaactggtgggaggagacgttga
DBGET
integrated database retrieval system
