Apteryx rowi (Okarito brown kiwi): 112978260
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Entry
112978260 CDS
T07573
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arow04040
]
112978260
Ion channels [BR:
arow04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112978260
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
112978260
NCBI-ProteinID:
XP_025947348
Ensembl:
ENSARWG00000004349
LinkDB
All DBs
Position
Unknown
AA seq
1996 aa
AA seq
DB search
MAEFLFPGANNFRKFTFESLAAIEKRIAAKRTCRRNIVDQRPEKKSRPQLDLKAFQKLPA
LYGNPPPELIGEPLEDLDPYYKDRKIFMVLNKQKTIFRFTATRALWILSPFHPLRRTAIK
ILVHSLFTWFIMCTIITNCVFMALTESSKVSQSSSWNRQVEFTFTSIYTFESLIKILARG
FCLNEFTFLRDPWNWLDFSVIIMAYVGAFSNLGSVSVLRTFRVLRALKTISIVPGLKIIV
GALIQSVKKLADVMILTVFCLSVFALIGLQLFKGNLRQKCIRNHTKLDDLVYSSNKTWES
FEMFASDTENFAKKEGTSDILLCGPGAGTCPPEYVCKKVGPNPDYGFTSFDTFGWAFLSL
FRLMTQDCWERLYQQTLRASGKVYIVFFILVIFLGSFYLVNLILAVVTMAYEDQNKATIA
ETEAKERKFQEAMELLQKERESLAVRGIDIMSVSSFEVSSLSTKEIKERSNRKKRNKSLG
IEDYEEEQFPKSQCTDSQRKLALLGLVHGPNVNHVKRRLSHGSVFNFQIPGSKADFSDEE
TRSAGENEIQRRSLSVTQMGRRSSVQSQVSHGSHPATPNCLQSSGKWTNTDNCNGAISSV
GGGNGRVHSLDPASSEGLMLPPVMEVPGKGDLQPAVNDENSMVHLPPHLSVEYFNEALQR
QRAASAVSIITSVLEELEESQWRCPPCLKNFALKYFIWDYCPLWLRIKKKVAAFIKDPFI
DLTITICIVMNTLFMALEHNNMSDNFKSMLNVGNLVFTGIFTAEMILKIIALDPYYYFQQ
PWNIFDSLIVTLSLIELGLSKNKKDGRKGGSMTILRSFRLLRVFKLAKSWPTLSTLIKII
GNSMGALSNLTLVLAIIVFIFAIVGVQLFGRSYGENCHNITKNGKLRWHMKDFFHSFLII
FRILCGEWIETMWECMVVAERPLCLLVFLLVMVIGNLVVLNLFIALLLNSFSTDCLQTTE
DDGEMNNLQIAFAQIHKGFHHVKSITWDACCGKLRHLKKAHRKKIKLTAQNRFGFGTQGK
NCKENYSNEGTEKNGDKCSNLEDFINNPNIFVCVPIAEAENISEGFEDDDKLSTFTDTEY
SEKEENQLRQRGERGKSSGSWSKGSGFSSEEFSVLCLEKDRKASPEQKELDSVSSSEGST
VDLTNPEDLLRQIPEFAENLKNPDMCFPESCFRYFHCYAGKAVNLGGQTWWNMRKTCYQI
VEHSWFESFIIFMILLSSGALAFEDIHINKKRNIKIMLEFLDKIFTFIFVLEMLLKWVAY
GFTKYFTNAWCWLDFLIVHVSLISVIGSSFDYMKSLRTLRALRPLRALSRFEGMRVVVNA
LVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNLTEEDSELNSSINNISDCKIY
NNTGKIFWVNAKVNFDNVGSGYLALLQVATFKGWMDIMYAAVDSREKNEQPQMEQNLSMY
LYFVSFIIFGSFFTLNLFVGVIIDNFNQQKKKISGEDIFMTEEQKKYYNAMKKLGSKKPQ
KPIPRPLNKYQGFFFDIVTHQAFDVIVMILICLNMITMMVETDDQSETKTYVLNKINILF
VAVFTAECVLKLVALRQYYFSNAWNIFDLVVVIMSLIALLLSGIGKAFEHFLPPTLFRVI
RLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVKME
DGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNISGVVGECGKPAIG
IIYFVSYIIISFLIVVNMYIAVILENFNAATEESTEPLGEDDFDIFYEVWEKFDPEATQF
IAFSALSDFADALTQPLRVPKPNKVELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEM
DALKVQMEEKFMAANPSKISYEPISATLRHKQEEVCATVIQRAYRSHLLQRSIKQASYLY
HRRTCNGDVLGEGAPEKEGLIASMMDKNYGRSLDKFETLSSTSFPPSYDSVTRASSGNLM
VENEEFADNQQSPGIK
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcttatttcctggtgccaacaacttccgtaagttcacgtttgaatccttg
gctgctattgaaaagagaattgctgccaaaaggacttgtcgaagaaatattgtagaccag
agacctgaaaagaaatcacgccctcagctggacctaaaagctttccagaagttgcctgct
ctctatggaaatcctcctccggagctcattggggaaccactggaggatcttgacccatac
tacaaagatcgcaagattttcatggtgctgaacaaacagaaaacaatcttcagatttact
gctacacgtgccttatggatcctgagccctttccatccactccgaagaacagcaattaaa
attttagtacattcattattcacttggtttattatgtgcactattataactaattgtgtg
ttcatggctctgactgagtcatctaaggtttctcaatcttcttcttggaacaggcaagtt
gaattcactttcactagcatttacacttttgaatcattgataaaaatattggcaagagga
ttctgtctaaatgaatttactttccttcgagatccatggaactggttggatttcagtgtt
atcattatggcgtatgtgggagcatttagtaacttggggagtgtgtcagtccttcggacg
tttagggttttgagagctttaaaaactatttccatagtcccaggactcaagatcattgta
ggtgcactcatccagtctgttaagaaacttgctgatgtgatgatcctgaccgttttctgc
ttgagtgtctttgccctcattggcctccagctttttaagggcaatctgagacaaaagtgc
atcaggaaccatacaaagctcgatgatcttgtttattccagtaacaaaacatgggaatcc
tttgaaatgtttgctagtgatacagaaaactttgctaagaaggagggcacctcagatatt
ttactatgtggtcctggtgctgggacctgccctccagaatatgtatgcaagaaagttggg
ccaaatcctgattatggtttcaccagttttgatacgtttggctgggcctttctttcctta
ttccggctgatgacacaggactgctgggaacgcctctatcagcagacgctcagagcttct
gggaaggtgtatatagtcttctttatactggtcatctttctgggctcattttatctagtc
aacttgattctggcggtggtaacgatggcgtacgaagatcagaacaaggccaccattgct
gaaactgaggcaaaagaaaggaaatttcaggaagccatggaattattacagaaagaacgt
gagtcactggctgttagaggaattgatatcatgtcagttagctcctttgaagtctcttct
ttgtctactaaagaaatcaaagaaagaagcaataggaaaaagagaaataagtccctgggg
atagaagattatgaagaagaacaatttcccaagtcacagtgcacagacagtcaacgaaag
ttggctctccttggcttggtgcacggtcccaatgtgaatcacgtgaaacgcagacttagc
catgggagcgtgtttaatttccaaatacctggttccaaagctgattttagtgacgaggag
acccgcagtgccggcgaaaatgaaatccagcgtcggtcgctgtcggtcacgcagatggga
agacgctccagcgtgcaaagccaagtgagccacggttctcaccctgctaccccgaactgc
ctgcagagcagcggcaagtggaccaacacggacaattgcaacggagcgatttcatcggtg
ggaggagggaacggcagggtgcacagcctagatccagcttcttctgaagggctgatgctc
cctccagttatggaagtcccggggaagggtgatttgcagccagctgtaaatgatgagaac
agcatggtgcatttgcctcctcatctgtcagtggagtactttaatgaggcacttcaaaga
caaagggcagcaagtgcagtcagcataattaccagtgtcttggaggaacttgaagaatcc
cagtggagatgccctccatgcctgaaaaattttgctttaaagtattttatttgggactac
tgtccactttggttgagaatcaagaagaaagtggctgctttcataaaggatccttttatt
gacctcaccatcactatctgcattgtgatgaacactttgttcatggcactggagcacaat
aacatgtcagataattttaaatcaatgcttaatgtaggcaacttggtctttacaggaatc
ttcactgcagaaatgatcttgaaaatcattgctctagatccctattattattttcagcag
ccctggaatatttttgacagtttaattgtcacattgagcttaatcgaactgggtttgtcc
aaaaacaagaaagacgggagaaaaggaggaagcatgacaattttacgatccttcagactg
ctgagggtcttcaaactggcaaagtcctggccaactttaagcactcttattaaaatcatt
ggtaactcaatgggtgcgctgagtaatctgaccctcgtcctggcaatcatagtttttatt
tttgctatagtaggggtgcaactttttgggagaagttatggggagaattgccataacata
actaaaaacggcaagctacgctggcatatgaaggactttttccactcattcctcataatt
ttccgaattctgtgtggagaatggattgagaccatgtgggaatgcatggtggtagctgaa
cgaccattgtgcctccttgtctttttgctggtcatggtgataggaaatttagtggttctc
aacctgttcattgcactactactgaattccttcagcactgactgtctccagacaacagaa
gatgatggagagatgaataatcttcagattgcctttgctcagattcacaagggatttcac
catgtaaagagcattacatgggatgcctgttgtggaaagctcaggcatctgaagaaagca
cacagaaagaaaattaaattgactgcacagaaccgatttggttttggaacacaaggaaaa
aattgtaaagagaattacagtaatgaagggactgagaaaaatggggacaaatgctccaat
cttgaagattttattaacaatcccaatatatttgtttgtgtccctattgctgaggcagag
aatataagtgagggttttgaagatgatgataaactgagcacatttacagacacagaatat
agtgaaaaggaggaaaatcagctgaggcaaaggggagaacgagggaaaagctcaggaagc
tggagtaaaggatcgggattttcctctgaagaattcagtgtactttgcctagaaaaggac
aggaaggcatcgccagagcaaaaagagcttgacagtgtcagctcttctgaaggcagcaca
gtggacctgacgaatcccgaagatcttttgaggcagattccagagtttgctgaaaactta
aagaacccagacatgtgttttccagaaagttgctttcgatactttcactgctatgcgggt
aaagccgtaaacttgggaggacaaacatggtggaacatgagaaaaacttgctaccaaatt
gttgaacattcctggtttgaatcctttatcatattcatgattcttctgagcagtggagcc
ctggcatttgaagatatccatataaacaagaaaagaaatattaaaattatgttggaattt
cttgacaaaatattcactttcatctttgttctggagatgctcctgaaatgggtggcttat
ggcttcacgaagtatttcaccaatgcctggtgctggctggacttccttattgtacacgtc
tctttaataagtgtcataggtagttcatttgattatatgaaatctctgaggactctccga
gctctgagacccttgagagcattgtcacgatttgaagggatgagggtggtggtcaatgcc
ctcgtgggagccatcccttccatcatgaatgtcctgctcgtctgcctcatcttctggctc
atcttcagcatcatgggagtgaacctgtttgctggaaagtttgggaaatgtgtcaatttg
acagaagaagattcagaattaaacagctctattaataacatatcagactgtaaaatttat
aataatactggaaaaatattctgggtcaatgctaaagtcaatttcgataatgttggctct
ggttacctggctcttcttcaggtggcaacttttaaaggttggatggacattatgtatgcg
gcagtagattcacgagagaaaaatgaacagccgcaaatggaacaaaatctatcaatgtat
ctctactttgtgagcttcatcatcttcggatctttctttactctgaatctctttgttggt
gttattattgacaacttcaaccaacaaaagaaaaagataagtggggaagatatcttcatg
acagaggaacagaaaaaatattacaatgcaatgaaaaagttgggatcaaagaaacctcag
aagcctattccaagaccattgaacaaataccaagggttcttttttgacattgtaacacat
caagcctttgatgtcatcgtcatgattctcatctgcctcaacatgatcaccatgatggtg
gaaacggatgaccaaagtgaaacgaagacttacgttcttaacaaaatcaatatacttttt
gttgctgtctttactgcagaatgcgtactgaaattggtggctctgaggcaatattatttc
tcaaatgcttggaacatatttgatttagttgttgtgatcatgtcacttattgccttactg
ctttctggcatcggtaaagcatttgaacatttcttaccacctacactcttcagggtcatt
cgcttggctcgaattggacgaatactaaggctcatccgggctgccaaaggaattcgaact
ctcctttttgccttaatgatgtccctacctgctctgttcaacattggcctcttgcttttt
ctggtcatgttcatttatgccatttttggcatggctaactttgcctatgtgaagatggaa
gatggcattgatgatatgttcaacttccaaacctttgctaacagcatgctctgtctcttc
caaatcacaacatcagctggctgggatggtcttctcagtcctattttaaacactggacca
ccatactgtgatccaaacataagtggtgttgtaggtgaatgtggtaaacctgccataggc
attatttattttgtaagttacatcattatatcatttctcattgttgtaaacatgtacata
gctgttattttagagaacttcaatgctgccactgaggaaagcacagagcctctaggtgag
gatgactttgacatcttttatgaagtctgggagaagtttgatcctgaagcaactcagttt
atagctttctctgcgctttcagactttgcagatgctctgactcaacctttacgtgtacca
aagccaaacaaagttgaactcatagcaatggacctgcccatggtcagtggagataggatc
cattgcttggatattttgtttgcttttaccaaacgagtgttaggagactctggggagatg
gatgctctgaaagtacaaatggaggagaagttcatggctgccaatccttccaaaatatcc
tatgagccaatctccgctacacttagacacaaacaagaggaagtttgtgccactgtcatc
caacgtgcgtaccggagtcatttgcttcaacgctctataaagcaggcttcttacctgtac
catcgcagaacttgcaatggtgatgttcttggagagggtgctccagaaaaagagggactt
attgcatctatgatggataaaaactatggtaggagtctagacaagtttgaaactttgtcc
tcaacatcttttcctccatcatatgacagtgtcacaagagccagtagtggcaatctcatg
gttgagaatgaagaatttgcagataatcaacaatctccaggtattaaatag
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integrated database retrieval system
