Apteryx rowi (Okarito brown kiwi): 112978288
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Entry
112978288 CDS
T07573
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03013
Nucleocytoplasmic transport
arow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112978288 (CASC3)
03015 mRNA surveillance pathway
112978288 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112978288 (CASC3)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112978288 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
112978288
NCBI-ProteinID:
XP_025947403
Ensembl:
ENSARWG00000016629
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAASAALHPVSSLGYRDISVLPESIADESEDGIE
GDAVLSDYESAEDSEAEEEDYSEEESAKVELKQDSNDSCESAAKAEKGDEKPDSKGAVTG
ERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRP
KGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFG
SPPQRDPNWSNERPSKPPRHQGPDSASTPPRTFTNRSSAGTGRMPPPRNYPRMGGYKETR
PSYRASEASVQHLSRNGEQAKQESNYRAKRVEQTPARDKSPETEVAHVHSSPVKEEVALE
SQTTTADATQPPPDRPIEKKSYSRARRTRIKAGDAGKLADEVPASEGLTPVPPKPVQVET
SPPPAKSSNWESPVESSLDGLEQEMTQMNLTEQNWTPGQSQFIQPRELRGIPNHMHVGTG
PPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEGHYYDPLQFQGPIYTHS
ENPAPLPPQGMIVQPEMHLPHPGLHPHQTAAPMANPGLYPPPVSMPPGQPPPQQLLAPPY
FSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPP
RRTSQPVTIKPPPPEDSKSEKSKERSNT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggacagcgaggacgactccgactcggcc
gcctccgacagcgccgactcggccgccagcgccgcccttcatcccgtgtcttctcttgga
tacagagatatatctgtgttaccggagtctatagcagatgaaagcgaagatggcattgaa
ggagatgctgtactctcggattacgaaagtgcagaagactcggaggcggaggaagaggat
tacagtgaggaagaaagtgccaaagtggaattgaagcaggatagcaatgattcctgcgaa
tctgcagcaaaagcagagaaaggcgatgagaaacctgactccaaaggtgctgtaactggc
gagagacaaagtggggacgggcaggagagcactgaacctgttgagaataaagttgggaaa
aaagttcccaagcacctggacgatgatgaggatcggaagaacccggcttacatcccacgc
aaagggctcttctttgagcatgatctccgagggcagactcaagaggaggaggtcaggcca
aagggtcggcagaggaagctgtggaaagatgagggccgctgggaacacgacaaattccgg
gaggacgagcaggcccccaagaccaggcaggagctgatcgcactttatggctatgacatc
aggtcagctcacaaccctgatgacatcaagccgaggaggatgcgcaaaccaaggtttggg
agtcctcctcagcgagacccaaactggtccaatgagaggccaagtaagcccccaagacac
caaggcccagacagcgcttcaactccaccgcgaacgttcaccaacaggagctccgcaggt
acagggagaatgcccccacctaggaactatccgcggatgggtggctacaaggagacccgc
ccgagctaccgggcttcagaagcaagtgtccagcatctctctcgaaacggcgagcaggcc
aaacaggaaagcaattaccgagcgaagcgtgtagagcaaaccccagcgagagacaagtca
cctgagacggaagtggcacatgtccacagcagccctgtgaaggaggaggttgctttggag
agccagaccacgactgctgatgctacacagccaccaccagacagaccaattgaaaagaag
tcttattcccgggcaaggaggaccagaattaaagctggggatgcaggaaagttggcagat
gaagtacctgcttcagaagggctgacgcctgtgccaccaaaacctgtgcaagtggagaca
tcccccccaccagccaagagcagtaattgggagtcgccagtagaatccagcttggatgga
ctcgagcaagagatgacgcaaatgaatctcactgagcagaactggactccagggcagtct
cagttcatacagccccgggagctcaggggtattcctaaccatatgcacgtgggaactggg
ccaccgcctcagtttaacaggatggaggaaatggcggtgcaggggggccgcgtgaaacgc
tactcatcgcagcggcagagaccgccggttccagagcctgccccccctatgcacatcagc
atcatggaagggcactactacgacccactacaattccagggaccaatctacacccacagt
gagaaccctgccccgctgcctccccaagggatgatcgtacagccggaaatgcacctccct
catccaggtttacatccccaccagacggcagccccaatggcaaaccctgggctgtatcct
ccaccggtctccatgcctccgggtcagccccctccacagcagctgcttgcacctccttat
ttctcccctcctggagtcatgaattttgggaatcctggctacccttaccccccgggagca
ctacccccaccgccgcctcctcatctctattccaacacgcaggcccagtcccaggtgtat
ggaggggtcacgtactacaatactgtccagcagcaagtgcagcccaaaccttctccacca
cgaaggacatcccagcctgtgactatcaagccaccacctcctgaggacagcaaaagtgaa
aaatcaaaggagaggagcaacacgtag
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