Arthrospira platensis: NIES39_A03770
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Entry
NIES39_A03770 CDS
T02608
Symbol
sigD
Name
(GenBank) group 2 RNA polymerase sigma factor SigD
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
arp
Arthrospira platensis
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arp03021
]
NIES39_A03770 (sigD)
Transcription machinery [BR:
arp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIES39_A03770 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
HTH_Mga
MerR
MerR_1
Terminase_4
DUF5315
Motif
Other DBs
NCBI-ProteinID:
BAI88215
UniProt:
A0A9W4EIB2
LinkDB
All DBs
Position
complement(379040..380035)
Genome browser
AA seq
331 aa
AA seq
DB search
MGLICQSYRGDAMKTAKTSDTDSVRAYLREIGRVPLLTHEQEIVYGKQVQQATLLQEKRN
ELAKQLAYEPTEAQWAELVNLSVAQLQHILHQGQLAKRKMVEANLRLVVSVAKKYIKRNV
DLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEK
LNKIKKAQRQLAQQLGRAATMNELAAELDLTPKQIREYLEKSRLPLSLDLRVGDNQDTEL
VDLLEDTTNSPEQFALNSSLRSDLESLMTDLTDQQRQVLALRFGLDDGQTLTLAKIGDRL
NISRERVRQIEREALTKLRKRKQDVNDYLAS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgggcttaatttgtcagagctatcggggagatgccatgaaaactgctaaaacctcggac
accgactcggtgcgggcctacctgcgagaaattggtcgtgttcctctgctgacccatgag
caagaaattgtctatggtaaacaggtacaacaggcaactttattgcaggaaaaacgcaat
gagttggctaaacaattagcctatgaacctactgaggctcaatgggctgaattagttaac
ttgtctgtggcacaattgcaacatatcttgcatcagggtcaattagccaagcgtaagatg
gtagaggctaatctgcgtctggtggtctctgtggccaaaaagtatatcaagcgcaatgtg
gatctgctcgatctcattcaggaaggtactatcgggatgcaacgaggagttgaaaagttc
gatcctactaagggttatcggttttctacctatgcctattggtggattcgacaagccatt
acccgcgcgatcgctgaaaaaggccgtactattcgcttgccgattcatatcacagaaaaa
cttaataaaatcaaaaaggcacaacgtcaacttgcacaacagttaggccgagcagctact
atgaatgaattggctgctgagttggatctcactcctaagcagattcgtgagtatctcgaa
aaatcacgtcttcctttatctctcgatctgcgggttggtgataatcaggatacggaattg
gttgacctgttggaagatactaccaattcccctgagcagtttgctcttaattcttctttg
cgatcagatttagaatctttgatgactgatcttactgaccagcaacgacaggttttagct
ctgcgctttggtttggatgatggacagactttaactctcgctaaaattggcgatcgcctt
aatatcagtcgtgaaagagtccgacaaattgaacgggaggctttgaccaaacttcgtaag
cgcaaacaggatgttaatgattacctagctagttaa
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