Arthrospira platensis: NIES39_C00970
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Entry
NIES39_C00970 CDS
T02608
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
arp
Arthrospira platensis
Pathway
arp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES39_C00970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arp03019
]
NIES39_C00970
03009 Ribosome biogenesis [BR:
arp03009
]
NIES39_C00970
Enzymes [BR:
arp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NIES39_C00970
Messenger RNA biogenesis [BR:
arp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NIES39_C00970
Ribosome biogenesis [BR:
arp03009
]
Prokaryotic type
rRNA helicases
NIES39_C00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Cas3-like_C_2
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
BAI88967
LinkDB
All DBs
Position
complement(1124158..1125612)
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AA seq
484 aa
AA seq
DB search
MLELGSQRNRAKNNHIGDLMSQSFESLGISEQRARHLETLGFTEPTPVQIQAIPEMLSGR
DVVGMAQTGTGKTAAFSLPILEQIDVHAAGIQALVLTPTRELAMQVKEAIRTFSDDNALY
VLTVYGGQSIDRQIQRLRRGVQVVVGTPGRILDLLNRGELKLDLLRWLVLDEADEMLSMG
FIQDVEKILESADSEHRQTAFFSATMDASISKLVRRHLKSPVTVKVETPKATPKRIEQSV
YMVPRGWSKARALEPILELEDPESAIIFVRTKQSAADLTNQLQAAGHSVDEYHGNLNQSQ
RERLLMRLRRRQVRWIVATDIAARGLDVDHLTHVINYDLPDQVDSYVHRIGRTGRAGREG
KAITLIQPIDRRKLRNIERHLRQTLSIQSIPKRAEIEARYIDRLKDRVRDALAGERMASF
LPIVSQLSEEYDPHAIAAAALQLAYDQTRPASIGRDDYEDDDDAVSNKPKLIKRRRPASV
SNNS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgttggagttgggcagccaaaggaaccgggcgaaaaacaatcatattggagatttgatg
agtcaatcctttgaaagcttaggtatttccgaacaacgcgctcgccatttagaaacactg
ggtttcacagaacccaccccagttcaaatccaagccatacccgaaatgctatccggtcgg
gatgttgtgggtatggcacagacaggaactggtaagactgctgccttttcgctgcccatt
ctcgaacagattgacgttcatgccgctggtattcaagcgttggttttgactcccacccgg
gaactggcgatgcaggtgaaggaagctattcgcacttttagtgatgataatgccctgtat
gtgctgacagtttatggtggtcaatcaattgatcgacaaattcagcgactgcgacggggg
gttcaggttgtcgtgggaaccccagggcgtatcctagacctactgaaccgaggtgaactg
aaacttgatttactgcgttggttagtgttggatgaagcagacgaaatgctgagtatgggc
tttatccaagatgtggaaaaaatcttggagtcggccgactctgaacatcgtcagacggcg
ttcttctcagcaacgatggacgcttccatctcgaagttggtgcgacgacacctgaagtcc
cctgtgactgtgaaggtggaaactcccaaggctacgcctaaacggatcgaacagtctgtt
tatatggttcctcgtggatggtctaaagctcgcgccctagaaccgattttagaactcgaa
gatccagaatcggcgattatttttgtgcgaactaaacaatctgcggctgatttaactaat
caattgcaggcggcaggtcatagtgttgacgagtatcatggtaatctcaatcagtctcaa
cgggagcgactgttgatgcgtctgcgccgccgtcaagtgcgctggattgtagctactgat
atcgcagcgcgaggtctggatgtggatcacctcacccatgtgatcaactatgatcttcct
gatcaagttgatagttatgttcaccgcattgggcgtacaggtcgcgcgggtcgggaagga
aaggcaattactcttattcagcctatcgatcgccgtaagttgcgaaatattgaacgtcac
ctgcgccaaactttgagcattcagtcaatccccaaacgggcagaaattgaggcgcgttac
attgaccgactgaaagaccgggtgcgggatgctttggctggggaacgtatggcttctttc
ttgcctattgtctctcaattaagcgaggagtatgatccccatgcgatcgccgctgcggct
ttgcaacttgcttatgatcaaactcgtccggctagtatcggaagggatgattacgaagat
gatgacgatgccgtttccaacaaacctaagctaattaaacgccgccgcccagcttctgtt
tccaataacagttag
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