Limnospira platensis: NIES39_C05040
Help
Entry
NIES39_C05040 CDS
T02608
Symbol
crtH
Name
(GenBank) cis-carotene isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
arp
Limnospira platensis
Pathway
arp00906
Carotenoid biosynthesis
arp01100
Metabolic pathways
arp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
NIES39_C05040 (crtH)
Enzymes [BR:
arp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
NIES39_C05040 (crtH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
DAO
NAD_binding_8
FAD_binding_2
Pyr_redox_2
HI0933_like
FAD_oxidored
Thi4
Lycopene_cycl
FAD_binding_3
GDI
GIDA
Motif
Other DBs
NCBI-ProteinID:
BAI89370
LinkDB
All DBs
Position
complement(1533561..1535102)
Genome browser
AA seq
513 aa
AA seq
DB search
MPVITHQSFADEPLPTQDFDVIVIGSGIGGLVTATQLAAKGANVLVLESYIIPGGSSGYF
EREGYRFDVGASMIFGFGDQGTTNLLTRALEAVNVKLETIPDPVQINYHLPGELQVRVHR
DYEKFLQELGEKFPDEREGIRKFYDECWQVFNCLNAMELLSLEEPRYLMRVFFQNPGACL
GLVQYLPKNVGEVAKRHISNPELLKFIDIECYCWSVVPADLTPMINAGMVFSDRHYGGIN
YPKGGVGQIAEKLAEGLQKAGGTIQYKARAKQILIENGQAVGVELTNGRVYRARRIVSNA
TRWDTFGKLIPEKMMPSSEKKWRKRYQKSPSFLSLHLGVEASVLTPETDCHHIIVEDWQK
MEEPEGTIFVSIPTLLDPDLAPPGYHIIHAFTPSWIDNWEDLPPTEYEQKKEEAAWGIVD
RLEKIFPGLDAGLDYMEVGTARSHRRFLNRDDGTYGPIPSRQLRGLLGMPFNRTAIPGLY
CVGDSTFPGQGLNAVAFSGFACAHRIAVDLKLG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttattacccaccagtcctttgctgatgaacccctaccgactcaagactttgat
gtaattgtcatcggttccggtattggaggcttagtcacagccactcaactggcagccaaa
ggcgcgaatgtacttgtcctagaaagttacatcatccccggtggtagttctggttacttt
gagcgagagggatatcgatttgatgtcggagcatcaatgatttttggatttggtgaccaa
ggcacaactaacctgctcacccgcgccctagaagctgttaacgtcaaattagaaactatc
cccgacccagttcaaattaactaccacctacctggggaactccaagttagagttcaccga
gattatgagaaatttttgcaagaactaggggaaaagttccccgatgaacgagaaggaatt
cgtaagttttatgacgaatgttggcaggtctttaactgcttgaacgccatggaactcctt
tccctggaggaaccccgttatctgatgcgggttttcttccagaacccaggcgcttgtctg
ggactggttcaatacctacccaaaaatgtgggcgaagtcgccaaacgacacatcagcaac
ccggaattactcaaatttattgatattgagtgttactgctggtctgtggttcccgctgac
ttgactcccatgattaacgctgggatggtgttttctgaccgccactacggtgggataaac
taccccaaggggggagtaggtcaaatcgccgaaaaactggctgaaggcttacagaaagcc
ggaggaaccattcaatacaaagccagggctaaacagattttaatagaaaatgggcaagct
gtgggggttgaactcactaacggtagggtttaccgcgctcggcgcattgtttctaatgct
acccgctgggatacctttggtaaactaatccctgaaaaaatgatgccatcttctgagaaa
aaatggcgcaaacgctatcagaaatcgcccagttttctgagcttacatttaggggtagaa
gcctccgttttaacaccagaaacagattgtcaccacatcatagttgaagattggcaaaaa
atggaggagccagaggggacaatttttgtctctattcctaccctccttgacccggattta
gccccgcccggctatcatatcatccatgcttttacccctagttggattgataattgggaa
gatttaccaccgacagaatatgaacaaaaaaaagaggaggcagcctggggaattgtagac
cgtctggagaagatttttcccggtttagatgcgggtttggattatatggaagtgggaaca
gcgcgatcgcaccgtcgctttcttaaccgggatgacggaacctatggccctattcctagc
cgccaactgcggggactcctaggaatgccttttaatcgcaccgctattcccggtctgtat
tgcgttggagatagcacctttcctggtcaaggattaaatgctgtcgccttttctgggttc
gcctgtgcccaccgcattgccgtagatttaaagttaggctaa
DBGET
integrated database retrieval system
