Arthrospira platensis: NIES39_D00170
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Entry
NIES39_D00170 CDS
T02608
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
arp
Arthrospira platensis
Pathway
arp03030
DNA replication
arp03430
Mismatch repair
arp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES39_D00170 (holA)
03430 Mismatch repair
NIES39_D00170 (holA)
03440 Homologous recombination
NIES39_D00170 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arp03032
]
NIES39_D00170 (holA)
03400 DNA repair and recombination proteins [BR:
arp03400
]
NIES39_D00170 (holA)
Enzymes [BR:
arp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES39_D00170 (holA)
DNA replication proteins [BR:
arp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES39_D00170 (holA)
DNA repair and recombination proteins [BR:
arp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES39_D00170 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Anticodon_2
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
BAI89437
LinkDB
All DBs
Position
1602159..1603142
Genome browser
AA seq
327 aa
AA seq
DB search
MPIYLYWGDDDFSLSKAVDTLRESVVDPNWSSFNFDKILPDTPDSVISGLNQAMTPPFGL
GHRLVWLVNTPLTQHCSPEILQELDRTLPAIPETTTLLFSSPNKPDGRLKSTKLLQKYAQ
VKDFSAIPPWKTDQLEQRVREVAQQLGVKLKPESVEFLAEAVGNDTRQLYGEMEKLKLYA
DTIDRPLDIKTITPLIHSNTQNSLKLAIAIREGKTSQALGLIADLIAHNEPALKILATLV
GQFRTWLWVKLMIETGTRDDQEIARLAEVGNPKRIYFLKKEVQPLSLQQLQQTLPKLLQL
EISLKRGADEQSTLQTQIIELCRLFHR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttacctgtactggggggacgacgacttctccctgagcaaagcagtagacacc
ttgcgggaatctgtcgttgatcccaattggtctagtttcaattttgacaaaattctgccc
gatacaccagattcggtcatttctggactaaatcaagctatgactccaccattcggcttg
ggacatcgtttggtatggctagttaatacacccctgactcagcattgttctccagaaatt
ctacaggagttagaccgaaccttacccgctattcccgaaaccaccaccttattatttagc
agccccaataaacccgatggccgcctcaaatccaccaaactcctacaaaaatatgcccaa
gttaaggatttttcggcaataccaccctggaaaactgaccaattggaacagcgggtccga
gaagtagcccaacaactgggagtcaaacttaaaccagaatcagtggaatttttagccgaa
gcggtcggaaatgatacccgccaactctatggcgaaatggaaaaactcaaactatatgct
gataccatagaccgtcccctagacatcaaaactattactcccctaatccacagcaatact
cagaatagtctaaaactggcgatcgccattagagaaggcaaaactagccaagccctaggg
ttaattgccgatttaatcgcccacaatgaacccgccctcaaaatcctagctaccctagtc
ggacaattccgcacctggctatgggtcaaattgatgatcgaaaccggaaccagagatgat
caagaaatcgcccgcctagccgaagtcgggaaccccaagcgcatatacttccttaaaaaa
gaagtgcaacccctttccttacagcaacttcaacaaaccttacccaaattgctgcaattg
gaaattagccttaaacgtggcgcagatgaacagtcaacactacaaacacagataatcgaa
ctttgtcgcttatttcaccgttag
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