Arthrospira platensis: NIES39_D01160
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Entry
NIES39_D01160 CDS
T02608
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
arp
Arthrospira platensis
Pathway
arp03030
DNA replication
arp03430
Mismatch repair
arp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES39_D01160 (dnaE)
03430 Mismatch repair
NIES39_D01160 (dnaE)
03440 Homologous recombination
NIES39_D01160 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arp03032
]
NIES39_D01160 (dnaE)
03400 DNA repair and recombination proteins [BR:
arp03400
]
NIES39_D01160 (dnaE)
Enzymes [BR:
arp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES39_D01160 (dnaE)
DNA replication proteins [BR:
arp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES39_D01160 (dnaE)
DNA repair and recombination proteins [BR:
arp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES39_D01160 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
BOF
Motif
Other DBs
NCBI-ProteinID:
BAI89536
LinkDB
All DBs
Position
complement(1696297..1699956)
Genome browser
AA seq
1219 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPQLVSRAVELGMPAIALTDHGVMYGAIELIKICRSKGIK
PIIGNEMYILNADVTVQQRGIKKYHQVVLAKNTQGYKNLVKLTTISHLKGFQGKGIFARP
CINKELLEEYHEGLIVTSACLGGEVPQAILQRRMDIARQTVEWYKRVFGDDYYLEIQDHG
SPEDRIVNVALVQLAREFEVKIVATNDSHFISCNDVEAHDALLCINTQKLITEDNRLRYS
GTEYLKSAEEMMQLFRDHLPDEVIKEAIANTLEVAEKVEPYTGILGEPRIPDYPIPPNHT
ADTYLEEIAWEGLKKRLNAQGRSEIKPVYRERLEYELKMMQKMGFATYFLVVWDYIKHAR
DNHIPVGPGRGSAAGSLVAYALQITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIDRRD
EMIKYVTSKYGEEKVAQIITFNRMTSKAVLKDVARVLGIPYSKSDQMAKMIPVSRGKPTK
LKVMISDQSPSPEFKQAYDNDFVPIKNDAGEEVGTIAVRQWVDMAIRIEGTNKTFGVHAA
GVVISKQPLDEIVPLQRNNDGSVITQYFMEDIESLGLLKMDFLGLKNLTIIQRTLNYISQ
NHHLDIDPYNLAAEERKAMDILAKGSVKKMPEDVAKTYKILERGDLEGLFQLESSGMRQI
VKDLKPSSIEDISSILALYRPGPLDAGLIPQFINRKHKREPIRYEHKLLEPILNETYGIL
VYQEQIMKMAQDLAGYSLGQADLLRRAMGKKKASEMQKHRETFIDGATRNGVPQNIAEHL
FDQMVKFAEYCFNKSHSTAYGYITYQTAYLKANYPTEYMAALLTENSGNTDKVKAYIESC
KHLGIDVVPPDINRSNVDFTPIENRIVFGLSAIKNVGDGAIEHLLSVREEGGPFRSLADL
CDRINLQMVNSRALESLIKSGAFDSLHANRKQSIEYLNIVIPWAQDRAKNREIGQTNLFD
LVNYANTESNSPSGEPTFPKSDDYAPKDKLQFEKELLGFYVSDHPLKSLLDSGVLPDNVT
VDKLSEQKSKAAVKVAATLINIKPHLTKKGDRMAFLLLEDLTGQIDAVVFPSSYEAVQQE
LKENAVVVIEGKVEKRDDQTQIIVEAIKSADELVKPNNQPSSPSEITPNLAADSIIQLYL
TPEEICQLERLQTLKVILEEYRGNQELRRVPIQAVVDGQVSPKRLVRFGSQFWVENQEAI
VQQLKTSGFTVDVLSMSNE
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtcggactgcatatccacagtgactacagtctccttgatggcgcttctcaa
ctcccacagttggtcagtcgcgctgtggaattaggaatgccagcgatcgctctgacggat
catggggtgatgtatggggcgatcgaacttattaaaatctgccgcagtaagggtattaag
cctattattggcaatgaaatgtatatcctcaatgctgatgtcacggttcaacagcgagga
attaaaaaatatcatcaagtggtcttggctaaaaatacccaaggctataaaaacctggtt
aaattaactactatttctcacttaaaaggttttcaaggaaaggggatttttgctcgtcct
tgtattaataaggaactattagaagagtatcacgaaggcttaattgttaccagtgcttgt
ttggggggtgaggttccccaagctattcttcagaggcgcatggatatagcacgccaaact
gtggaatggtataaaagggtttttggggatgattactatttagaaattcaagatcatggt
tccccagaagaccgcattgttaatgtggctttggtgcaactggcgagggaatttgaagtc
aaaattgtggcgactaatgattcacactttatttcctgtaatgatgtggaagcacatgat
gctttattatgtattaatacacaaaagttaattactgaggataaccgattacgttatagt
gggacggagtacctaaaatccgctgaagagatgatgcaactgtttcgagatcatctcccg
gatgaggtgattaaagaggcgatcgctaataccttagaagtggcggaaaaagtggaaccc
tatacgggaattttaggggaacctcgtattcctgattatccgatacctccgaatcatacg
gctgatacttatttagaagaaatcgcctgggaaggcttgaaaaaacgattaaatgctcaa
gggcgatcggaaattaagcccgtctatcgagaacggctagaatatgaattaaaaatgatg
caaaaaatgggttttgctacctattttttagtagtttgggattacataaaacacgccaga
gataatcatattcccgtaggtcctgggaggggttcggcggcgggttctttggtcgcctac
gccctacaaattacgaatattgatccggttcatcacgggttactatttgagcgtttcctg
aacccagaacgaaaatctatgccggatattgatacagatttctgcatagaccgccgtgat
gaaatgattaaatatgttacctccaaatatggggaagagaaagttgctcaaattatcacc
tttaaccggatgacttctaaggcggtgctaaaggacgtggctagggtgttaggaataccc
tatagcaaatctgatcaaatggcaaaaatgattccggtatctcgtggtaaaccgactaaa
ttaaaggtgatgatttctgatcagagtccatccccggaatttaaacaagcatacgataat
gactttgtacccattaaaaatgatgcgggtgaggaagtgggaactattgctgtgcgtcag
tgggttgacatggcaattcgtattgagggaactaacaaaacctttggagttcacgcagcg
ggtgtggtgatttctaaacagcctttagatgaaattgtccctcttcaaaggaataatgat
gggtcggtcattactcaatattttatggaagatatagaatccttgggtctgttaaaaatg
gactttttgggcttaaaaaatttgacgattattcaaagaactttaaactatatttcccaa
aatcatcacctagatattgatccctataatttagccgctgaggaacgtaaagccatggat
attctggctaaaggttcggtgaaaaaaatgccggaggatgtggcgaaaacctataagatt
ttggaacgaggagatttggaaggtttatttcaactagaatcttcgggaatgcgtcagatt
gtgaaggacttaaagccttccagtattgaggatatttcttctattttggcattgtatcga
ccgggacctttagacgctggtttaattcctcagtttattaatcgtaagcataaacgagag
ccaattcgctatgagcataaacttttggaacctattttgaatgagacctatggaattttg
gtctatcaagaacaaattatgaaaatggctcaagatttggcggggtattctttgggtcag
gcggacttgctgcgacgtgctatggggaaaaagaaagcatcggaaatgcagaagcatcgg
gaaacttttattgatggtgcgacgcgcaatggggtccctcaaaatatcgcagaacatttg
tttgaccaaatggttaagttcgcggaatattgttttaataaatcccattctacagcctac
ggttacattacttatcagacggcttacttaaaggctaattatccgacagagtatatggcg
gctttgctgacggagaatagtggcaatactgacaaggttaaggcttatattgagtcctgt
aagcatttgggtatcgatgttgttccccctgatattaatcgctctaatgtggattttacg
cctatagaaaatcggattgtgtttgggttgtcggcgattaaaaatgtgggagatggtgcg
attgaacacttgctatctgtacgagaggaagggggaccttttcggagtttggcggatttg
tgcgatcgcattaatttacaaatggttaatagtcgcgctttggaatctttaattaaatcg
ggtgcttttgatagtctccatgctaaccgcaagcaatcaattgaatatttgaatatagtt
attccttgggcgcaagatagggcgaaaaatcgggaaattggtcaaacgaatttgtttgat
ttggtcaattatgcaaatactgagagtaattcaccttctggggaacctacttttcctaaa
agtgatgattatgcgcctaaagataagttgcaatttgagaaggaattactagggttttat
gtttcggatcaccctctcaagtctttgttagactcaggggtactgccagataatgtgact
gtggataaactgtcagaacaaaagtcaaaagctgctgttaaggtggcggcgactttaatt
aatattaagccccatttgactaaaaaaggcgatcgcatggcgtttctattactagaagat
ttgacgggacaaattgatgctgtggtgtttcctagtagttatgaggcggtacaacaggag
ttaaaagaaaatgcggttgttgtgattgagggtaaggtggaaaaacgggatgatcagact
caaattattgtggaggctatcaagtctgctgatgagttagttaaaccgaataatcagcca
agttccccctcggaaattacacctaatttggcggctgattcgattattcaactctattta
actcctgaagaaatttgccaattagaaaggttacaaaccctgaaagtaattttagaagaa
tatcgaggtaatcaggagttaagaagggttcctattcaagccgttgttgatggtcaagtt
tcgcctaaacgactggtgcgctttgggtcacaattctgggtagaaaaccaagaggcgatc
gtacaacagttaaaaacttctggttttactgttgatgtactatcaatgagtaatgaataa
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