KEGG   Arthrospira platensis: NIES39_D05870
Entry
NIES39_D05870     CDS       T02608                                 
Symbol
sigF
Name
(GenBank) group 3 RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
arp  Arthrospira platensis
Brite
KEGG Orthology (KO) [BR:arp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arp03021]
    NIES39_D05870 (sigF)
Transcription machinery [BR:arp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NIES39_D05870 (sigF)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 Sigma70_ECF HTH_24 HTH_23 HTH_3 HTH_8 HTH_Crp_2 HTH_AsnC-type HTH_17 HTH_30 KORA MarR_2 HTH_28 HTH_Tnp_ISL3 HTH_50 HTH_10
Other DBs
NCBI-ProteinID: BAI90004
LinkDB
Position
complement(2161365..2162150)
AA seq 261 aa
MQTTVSNQLKSESLELLREYQHSPSNSIRNQLVQINIGLVRKEVHHWLNQCTESYDDLLQ
VGCIGLIRAIERFDMSKGHAFSSFAIPYIRGEIQHYLRDKSPSVRVPRQWLTLLRKATPC
IQELQVKLGRKPTDVEIASALEISVEEWNQVKLASQNRSLLSLDAPIQDEEEGSTSLGDL
VPDTRYRSFQLAQEDQIRLQQALGHLEDGTRKVLEFVFLYDLTQKETAEKLGISAVTVSR
RVKRGLSLLKTMMNGPSDSDR
NT seq 786 nt   +upstreamnt  +downstreamnt
atgcagaccacagttagtaaccaactcaaatctgaaagcctggagttgctgcgcgagtac
cagcactccccgtctaacagtatccgtaatcaactcgttcaaattaacattggattagtc
cgtaaagaagtccaccactggctcaaccaatgtacggaaagctatgatgatttgttacag
gtgggctgtattggcttgattagagccatagaaaggtttgatatgtctaagggtcatgcc
tttagctcctttgcgattccctacattcgcggggaaattcaacactatttgcgcgataaa
agcccctcggtgcgggttccccgtcagtggctaactctactgcgtaaagccaccccatgt
attcaagagctacaagtaaagttgggacgcaaacccaccgatgtcgaaatagcctcagcc
ctagaaatttccgtagaggaatggaaccaggttaaactggcttcccaaaatagatctctg
ttgagtttagatgcacccattcaggacgaagaagaaggatcaaccagcctgggtgattta
gtcccagatactcgttaccgcagcttccaactagcccaagaagatcaaattcgtctccag
caagcactgggacatttagaagacgggactcgcaaagttttagagtttgtgtttctctat
gacctcacccaaaaagaaacagccgaaaaattgggaattagcgccgttacagtctctcgg
cgagttaaacggggtttaagtctgctcaaaaccatgatgaatggcccctctgattctgat
aggtag

DBGET integrated database retrieval system