Limnospira platensis: NIES39_D06630
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Entry
NIES39_D06630 CDS
T02608
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
arp
Limnospira platensis
Pathway
arp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIES39_D06630 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arp03021
]
NIES39_D06630 (rpoA)
03400 DNA repair and recombination proteins [BR:
arp03400
]
NIES39_D06630 (rpoA)
Enzymes [BR:
arp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIES39_D06630 (rpoA)
Transcription machinery [BR:
arp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIES39_D06630 (rpoA)
DNA repair and recombination proteins [BR:
arp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIES39_D06630 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
DUF6964
TraU
Motif
Other DBs
NCBI-ProteinID:
BAI90080
LinkDB
All DBs
Position
2237670..2238614
Genome browser
AA seq
314 aa
AA seq
DB search
MAQFKIECIESNISTDRSQYGKFVLGPLDRGQGITVGNALRRVLLSNLEGTAITAVRIAG
VNHEFATIDGAREDVLEIMLNLKEAVLKSHTHQKQIGRLLVQGPATVTVGHFDLPSEVEV
VDKNQYIATLSPGATLEMECQIEKGTGYRAVDRHRDDSAALDFLQIDAIFMPVRKVNYTV
EDARDGGSLEKDRLTLEIWTSGSLTPQEAISQAAAILVDLFGALKDINLESITSDQRDDI
DPTSQIPIEELQLSVRAYNCLKRAQINSVADLRDYTEEDLLEIKNFGQKSAEEVIEALQN
RLGITLPKERAAKS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttaagattgagtgtattgaatccaatataagcactgaccgtagtcagtat
ggcaaatttgtcctgggaccgttagatcgtggccagggaataaccgttggaaatgcacta
aggcgggtgctgctgtcaaatttagaagggactgccattacggcggtcagaattgctggg
gttaaccacgaatttgcaacgattgatggggctcgggaagatgtcctagagatcatgctg
aatttgaaagaagcagttctcaaaagccatacccatcagaagcaaattggccgtctcttg
gtgcaaggtccagcaaccgtaacagtcggccatttcgatttaccctcggaagtggaggta
gtcgataaaaatcaatatattgctaccttatccccgggggcaactctggagatggaatgt
cagattgaaaaggggacagggtatcgagcggttgatagacatcgggatgattctgcggct
ttggattttctccaaattgatgcaattttcatgccggtgcggaaggtaaactacactgta
gaagatgcccgcgatggcggatctttagagaaagatcggctaacgttggaaatctggacc
agtggtagtttgactccccaagaagctatcagtcaagcggcggcgattttggtggaccta
ttcggtgccctgaaagatatcaacctagaatcaattacgagcgatcaaagggatgatatc
gatcctaccagccagatccccattgaggagctacaactttcggttagggcttataactgc
ctcaaacgagcgcaaatcaactcggtggcggacttacgagattatacggaggaagatctc
ctagagatcaaaaatttcggtcaaaagtctgctgaagaggtgatcgaagctctccaaaat
cgcctaggaattactttacctaaagagcgagctgctaaatcttga
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