Limnospira platensis: NIES39_E00250
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Entry
NIES39_E00250 CDS
T02608
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
arp
Limnospira platensis
Pathway
arp00300
Lysine biosynthesis
arp00470
D-Amino acid metabolism
arp01100
Metabolic pathways
arp01110
Biosynthesis of secondary metabolites
arp01120
Microbial metabolism in diverse environments
arp01230
Biosynthesis of amino acids
Module
arp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES39_E00250 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES39_E00250 (dapF)
Enzymes [BR:
arp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NIES39_E00250 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
BAI90260
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Position
complement(2422887..2423774)
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AA seq
295 aa
AA seq
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MQEIEISVMAIEFTKYHGLGNDFILIDNRHQSEPICTQKQAVQMCDRHFGIGADGVIFAL
PGDGASDYTMRIFNSDGSEPEMCGNGIRCLAKFIAELEGKTGTAIAYKINTAAGVICPQL
LTDGQVKVDMGLPRLLAAEIPTTLSENSLKVIDVPLQVAGQPWSVTCVSMGNPHCITFVD
DVASVPLTEIGPLFEHHPAFPERTNTEFIEVVRPDYVKMRVWERGAGITLACGTGACASV
VAGVLTQRCDRQVTVELPGGCLQIEWSATDQRLYMTGPAQRVFQGQLTFPIMNNN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagattgagatatcagtgatggcaattgagtttacaaagtatcacggtttgggt
aatgattttattctgattgataaccgtcatcagtcggagccaatttgtacacagaaacaa
gctgtgcaaatgtgcgatcgccattttggtattggtgctgatggggtaatattcgccctt
cccggtgacggggctagtgactacaccatgagaatatttaactctgatgggtccgaaccg
gaaatgtgcgggaatggaattcgctgtctggctaagtttatcgctgagttagaagggaaa
actgggacggcgatcgcttataaaattaataccgccgccggggtgatctgtccccaactt
ttaaccgatggtcaggttaaagtagatatgggattaccacggctactggcggcggaaatt
cccaccaccctatctgaaaatagcctcaaggttatcgatgttcccctacaggtagcagga
cagccctggtctgttacctgcgtgagtatgggaaacccccactgcatcacttttgtagat
gatgtggctagtgttccattaacggaaattggtccgttgtttgaacatcatccggctttt
cctgaacgaaccaatacagaatttattgaagtagtgcgaccggattatgtcaaaatgcga
gtttgggaaaggggtgctgggataactttagcctgtggaactggggcttgtgcttctgtg
gtggcgggagtattaacccaaagatgcgatcgccaagtaactgtagaacttccagggggt
tgtctacagattgaatggtcagctacagaccaacggttatatatgactggaccagcccaa
agagtttttcagggtcagttaactttcccaataatgaacaataattag
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