Limnospira platensis: NIES39_J00070
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Entry
NIES39_J00070 CDS
T02608
Name
(GenBank) MscS mechanosensitive ion channel family protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
arp
Limnospira platensis
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arp02000
]
NIES39_J00070
Transporters [BR:
arp02000
]
Other transporters
Pores ion channels [TC:
1
]
NIES39_J00070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
BAI91059
LinkDB
All DBs
Position
complement(3262054..3264114)
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AA seq
686 aa
AA seq
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MKTRWRILPLEAIACLDKSLGLTINYKILRKITYFVSVLVLTFSLTVAGHSPAFGQFFVS
PVSITDQQNQTFLWNVNRAYSCGASWCSRVYLGGHGGRGGLILGARRSLEQDDRATALTL
ERRAKLVQESFNRGLRNIISRNQELPQTYHPENWQFWRLFNPDKPLHPLTPQLNIGIQNN
ETVIYTQPNHDLRIPQIVVITVNNHDAIVNGITVEELAPVWRDQITQYASEALWGREFDA
QYPLGRITITLIIVAFIFLCLRLISGLRKLLTQRRNLIKSQLQNLVNEAKVNPETLSGET
LSDTVVQPNEDISDDADKVKNVNSNGQGYSSGYLHQKINQKINQIPKLIARRLNSQVSLQ
QGKNLVELLRRFLLIAELLVILLGISLICFVFRQTRPLIIMFAYQAILLPSLWVGITLID
KLLDFFIDDTLNGWAQEQQESHPNLNRYTMRVSTYSPALKGGKSWLFSGLGIYFTVVIIG
INTAFLAGAGAFALLTAFLSRNLIENMLNGILILLTDRYAVGDVVQIGNLAGAVESMNLY
CTNLRNLDGQLITIPHGQVATVINNTKDWSRVNLGLKIAWDADIRKAMEIILKVCQKMQN
EAEWSDKILEPVDILGVDDISHEGIVIRFLVKTIPSQQWAAARTLRFRLKQALDEAEITL
GVPQRFVWYHQHDHQTSRDFKNLLKP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactcggtggaggattttacccctagaggcgatcgcttgtttagacaaatcccta
gggttgactataaattataaaatactccgaaaaattacttattttgtaagcgttttggtc
ttgacattttccttaactgtcgctggtcacagcccagccttcgggcaatttttcgtatct
cccgtctcaattaccgatcaacagaatcaaacctttttgtggaatgtcaaccgtgcttat
agctgtggtgctagttggtgtagcagagtttatttaggcggccacggtgggcggggagga
ttaatcctcggtgcgcgacggagtttagaacaagatgaccgcgccactgccttaacctta
gaaagacgtgcaaaattagtacaggaatcctttaatcgaggtctccgtaatattattagc
agaaatcaagaattaccacaaacatatcatcccgaaaattggcagttttggcggttgttt
aatccagataaacctctacatccattgaccccgcaattaaatataggaattcagaataac
gaaacggtaatttatactcaaccaaatcatgatttacgcatccctcaaattgtagtaatc
accgtcaataatcatgatgccattgttaatggtataacagttgaagaattagcaccagtt
tggcgagaccaaatcacgcagtatgctagtgaagccttatgggggcgagaatttgatgct
caatatcctttaggaagaatcaccatcaccttgattattgtagcatttattttcctatgt
ctgaggctaatttcggggttacgaaaattactaacacaacgacgcaatctaattaaaagc
caattgcaaaatctggtgaatgaagctaaagttaaccccgaaaccttatcaggagaaact
ctttctgatactgtagttcaaccgaatgaagacatcagtgatgatgccgataaagttaag
aatgtcaacagtaatggccaaggctatagttcaggttatctgcatcagaaaattaatcag
aaaattaatcaaatccctaaactgatcgccaggaggttaaatagtcaagtatcacttcag
caaggcaaaaacttagtagaattattgcggagatttctgctgatagcggaattattagtg
attttattaggtatcagtttaatttgtttcgtatttcggcaaactcgtcctttaattatt
atgtttgcctatcaagcaattctgctccctagtctttgggttggtattaccttaattgat
aaactgttagattttttcattgatgataccttaaatggttgggctcaagaacaacaagaa
tcccatcctaacttgaatcgttacactatgagagttagcacctattctccggctctcaaa
ggtggtaaaagttggcttttctccggtcttggtatttatttcactgtggtaattattggc
atcaatacggcgttcctagccggtgcgggagccttcgctttattaacagcttttctatct
cgtaatttaatagaaaatatgttaaatggcattttaattttgctcacagaccgttatgct
gtaggtgatgtcgtccaaattggcaatttagccggagccgtagaaagcatgaatttgtat
tgcactaatctccgcaatttagatggtcaattaataactattccccatggtcaagttgcc
acagttattaataatactaaagactggtcacgggtgaacctcggcttaaaaattgcctgg
gatgctgacatcagaaaggctatggaaattattcttaaagtctgtcaaaagatgcaaaat
gaggcggaatggtctgacaagattttagaacctgttgatattctgggggttgatgatatt
tcccatgagggaattgtgatccggtttctagttaaaactatacccagccaacaatgggcg
gcagcacgaaccctgcggttcagactcaaacaagccctagatgaagcagaaattacccta
ggggttccccagcgtttcgtatggtatcatcaacatgatcatcaaacttctagggatttt
aagaatttgctcaaaccctga
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