Limnospira platensis: NIES39_J00660
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Entry
NIES39_J00660 CDS
T02608
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
arp
Limnospira platensis
Pathway
arp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES39_J00660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arp02000
]
NIES39_J00660
Transporters [BR:
arp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NIES39_J00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_5
NACHT
NB-ARC
AAA
PRK
NPHP3_N
RNA_helicase
MMR_HSR1
ATP-synt_ab
Viral_helicase1
AAA_19
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAI91118
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All DBs
Position
3330225..3331877
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AA seq
550 aa
AA seq
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MFTIENLRVAYPSQNKSPSWVVDDVSLTLKPGERLGLVGESGCGKSTLGRAAMRLLPESS
LIQGQVTFGGQSVFDLNDKELRQFRGEAIALVFQDPMTRLDPLMTIGEHCIETLKAHELE
LSRSQAKERAIATLEAVQIQPQRWSQYPHEFSGGMRQRVAIALALLLNPKLIVADEPTTS
LDVTVSAQILQELTRLCRERGTAILLISHDLAMVGEYCDRIAVMYQGKIVEVGDSRTVLQ
YPQHQYTRSLLESALHVHGTSQQPPEPNTPEQQTQTNPSQPLLQIENLQQHYSLESGIIE
QIFTKNKQLIKAVDGVSFELSPGEIFGLVGESGCGKSTLSRTILQLVRATAGTVKFEGQD
LTAMSVRQVRSQRRDIQMIFQDPNACLNPMMTIGRAIADPLLIHKMAKPPQAKRWVLEML
DRVGLTPVEEFYNRYPKQLSGGQQQRVAIARALITRPKLVICDEPVSMLDASVQAQVLQL
MLELKRDFNLTYLFITHDLWVARFLCDRIAVMNAGKIVEIGNTEQIFKHPQHPYTQTLLS
AAPLLTKMVI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccatcgaaaacctgcgagtagcttatcccagtcagaataaatcaccctcttgg
gtcgtagatgatgtttccctaaccctcaaaccgggggaacgtttgggacttgtcggtgag
tctggctgcggtaagtctactttgggacgcgctgctatgcgcttacttccagagtcgagt
cttattcaaggtcaagtcacatttggcggacaatcggtttttgaccttaacgacaaggaa
ttgcgacagtttcggggggaggcgatcgccttagtgtttcaagaccccatgacccgcctt
gatccgttgatgactattggggaacattgtattgaaactttaaaggctcatgaactagaa
ttgtcccggtctcaggcgaaagaaagggcgatcgctactttggaagctgtccaaattcaa
ccccaacgctggtctcaatatccccatgagtttagtggcggaatgcgtcaacgggtggcg
atcgcattagccctattgttaaacccaaagttaattgtagctgatgaacctaccaccagt
ttagatgtcacagtatcagcacagattttacaggaactcacccggttatgtcgtgaacgc
ggaaccgctatcctattaatttcccatgatttagccatggtgggagagtattgcgatcgc
attgcggttatgtatcaaggtaaaattgtcgaagtcggagatagccgcaccgttctacaa
tacccccaacatcaatatacgcgatcgctcctagaatctgctctccacgttcatggaact
tctcaacagccaccagaacccaatactcccgaacaacagacacagactaacccatcacag
ccacttctgcaaattgaaaatctccaacagcattatagtttagaatccggcattattgaa
caaatattcactaaaaacaagcaattaatcaaagccgttgatggcgtgagtttcgagttg
tctcctggtgaaattttcggtttagttggagagtccggctgcggtaaaagtaccctctcg
cgtaccattttacagttagttcgcgccaccgctggtacagtcaaatttgagggtcaagat
ttaaccgctatgtcagtgcgacaagtgcgctcacagcgtcgcgatatccaaatgatattt
caagatcctaatgcttgtttaaatcccatgatgaccattggtcgagctattgctgaccca
ctgttaattcataaaatggcaaaaccaccccaagccaaacgctgggtattagaaatgctc
gatcgcgtgggtttgactcccgtagaggagttttataaccgctatcctaaacaactgtca
ggaggacaacagcaacgggtagccattgctcgtgctttaattactcgcccgaaactggta
atctgtgatgagcctgttagtatgcttgatgctagtgttcaggctcaagtattacagtta
atgttggaactcaagcgagactttaatctcacctatttatttattacccatgatttatgg
gtcgctagatttttgtgcgatcgcattgccgttatgaacgctggtaaaattgtcgaaata
ggaaacactgagcagatttttaaacatcctcagcatccctacacccaaacccttctcagc
gccgctcctttgctcaccaaaatggtaatttag
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