KEGG   Limnospira platensis: NIES39_J03620
Entry
NIES39_J03620     CDS       T02608                                 
Name
(GenBank) Csm5 family CRISPR-associated RAMP protein
  KO
K19140  CRISPR-associated protein Csm5
Organism
arp  Limnospira platensis
Brite
KEGG Orthology (KO) [BR:arp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:arp02048]
    NIES39_J03620
Prokaryotic defense system [BR:arp02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    NIES39_J03620
SSDB
Motif
Pfam: RAMPs DUF5733
Other DBs
NCBI-ProteinID: BAI91409
LinkDB
Position
complement(3627169..3628437)
AA seq 422 aa
MVSALNISKPQVYETRTIQLSSPLLHIGSAVSRLNPFEYVQTSQRVYLPDQEALARALSN
RGKLHDYIGAIEHRQEILSILESAFGKNWQNAEDILGNPIFPLGAIDRKWTDEKVTDLRP
MIRNGFGQLYIPGSSIKGAIRTAIAYYLLKNADQYGVPNSNRVSAIEERLRQQLDNDHLK
RQQKWADDELFMDSLFADFSLNYQGKSMAERTGPNTDIMRAVQVTDSQPLIERKVTINNR
QVTFNIPVVAEILVSSHFENENAKYRASIYAEVVRNVKTKFTLSLDTEMLSWFQHKRGMK
MPFKSVDELLKICQSFAQEQWDGEHDYWSMVKNQKHQGKNLDFTAIRDFYEPERCPYHLR
IGWASGMTGTTVGWLFADDLRAKIRDTCGIKAPNFEAPKSRRTVVDPQGNIKYVPGWVKF
RG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggtttcagctttgaatatttccaagcctcaagtttatgaaactagaacaattcagtta
tcgagtccgcttttacacattggctctgcggtgtctcggctcaacccatttgaatatgtt
caaaccagtcaaagagtctatcttccagatcaagaagctctggctagagcgttgtcaaat
cgaggaaaattgcatgattatatcggtgcgatagagcatcgacaagaaattctcagtatt
ctggaatcagcttttggtaaaaattggcaaaatgctgaagatattttgggaaatcctatt
tttccactaggagcaattgacaggaaatggactgatgaaaaagtaactgatttacggccc
atgattcgtaatggattcggacagctttacattcccggcagctcaattaaaggtgccatt
agaacagcgatcgcttattacttactcaaaaatgctgatcagtacggagttcctaattct
aaccgagtgagtgcgatcgaggaacgactgaggcagcagttagataatgaccacttgaaa
agacaacaaaagtgggcagacgatgagctattcatggatagtttatttgcggatttctca
ttaaattatcagggtaaatcaatggcagagcgtaccgggcctaatactgatattatgcga
gctgttcaagtcactgattctcaacctctaattgaaagaaaagtgacgattaacaacaga
caagttacttttaacattcccgttgtagctgaaattctggtttctagtcattttgaaaat
gagaatgctaaatacagagcttctatttatgcagaagttgtccgaaatgttaaaaccaag
tttactttgtccttagatacggaaatgttatcctggtttcaacacaaaagaggcatgaaa
atgccttttaaatccgttgatgaattgctgaaaatttgccaaagttttgctcaagaacag
tgggatggagaacatgattactggagcatggttaaaaaccaaaagcatcaaggtaaaaat
cttgatttcacagcgattagagatttttatgaaccagaaagatgcccttatcatttgcga
ataggttgggctagtgggatgaccggaacaaccgtaggatggctatttgcagatgatttg
agagcaaaaattagagatacttgtgggataaaagctcccaactttgaagctcccaaatct
cgtcgtactgtggtcgatcctcaaggcaatattaaatatgtcccggggtgggtaaagttt
cgaggataa

DBGET integrated database retrieval system