Limnospira platensis: NIES39_K05100
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Entry
NIES39_K05100 CDS
T02608
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
arp
Limnospira platensis
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arp03032
]
NIES39_K05100 (topA)
03400 DNA repair and recombination proteins [BR:
arp03400
]
NIES39_K05100 (topA)
Enzymes [BR:
arp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES39_K05100 (topA)
DNA replication proteins [BR:
arp03032
]
Prokaryotic type
DNA Topoisomerases
NIES39_K05100 (topA)
DNA repair and recombination proteins [BR:
arp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES39_K05100 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BAI92155
LinkDB
All DBs
Position
4405466..4408237
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AA seq
923 aa
AA seq
DB search
MSTLVIVESPTKARTIRNFLPKDYQVEASMGHIRDLPPSADEIPEEYKGKTWAGLGVNVE
GNFEPIYVIPKDKQKVVKELKKALKQATELVLATDEDREGESISWHLLQVLKPKIPTRRM
VFHEITSEAILQALQHCRDLDEQLVHAQETRRILDRLYGYTLSPLLWKKIARGLSAGRVQ
SVAVRLIVNRERERRAFRQGGYWDLKALLEQGKTEFEAKLITLNGVKVATGSDFDESTGQ
IAQGRNVVLLDSDQAQALKERLREKLWSVRNIDERSVTRKPAPPFTTSTLQQEANRKLRL
SARQTMQVAQGLYERGYITYMRTDSVHLSEQAIVAARNCVEQKYGKEYLSPKPRQYTTKS
KGAQEAHEAIRPAGNYFRTPQETELSGNDLKLYDLIWKRTVASQMADSRQTNISVDLQVE
DAGFRATGKRIDFPGFLRAYVEGSDDPDAALENQELPLPPLKVGQHPDCKDLEAIGHETQ
PPARFTEASLVKTLESEGVGRPSTYASVIGTIIDRGYAQIKGNALIPTFTAFAVNSLLEK
HFPDLVDIGFTARMENTLDEIATGQADQLPYLQKFYSGDGGLENQVKEQESQIDAKVART
IELENLGDATDGMTYRLCLGRFGPYIEAQKDEEIITASIPQDLTPADLTPELIQELIGQK
TEGPEKLGVHPEAGEPIFMLIGPYGPYVQLGEESETNKKPKRVSLPKGLEKDAVTLDVAV
SLLSLPRLLGLHPETGAKVKAAIGRFGPYVVHESKEAKDYRSIKAPDDVLTITFERALEL
LAQPKVGRRGTKKTLTPLRELGEHPEDGEPLNIYDGRYGPYIKHGKINASLPKDQAIETF
TLEQALELLKAKAASGSKSKSKSKSTSSTTAKKSTTAKKSTTAKKSTTAKKSTTAKKSTT
AKKSTTAKKSTTAKKSSTKGETE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactttagttatcgttgaatcaccgaccaaagcccggactattcgtaacttctta
ccgaaagactatcaggtagaagcctcaatgggccatatccgagatttaccaccctctgct
gatgaaattcccgaagagtacaaggggaaaacatgggcagggctaggggtaaacgtggaa
gggaattttgagcctatttatgtaatccccaaagataagcagaaagtggtcaaagaactc
aagaaagcgctcaaacaagcgacagaattagttctagcgaccgacgaagaccgagaaggg
gaaagtattagctggcacttgttgcaggtgctaaaaccgaaaattcccacccggcgtatg
gtgttccatgaaattacctccgaagccatactccaagccctacaacattgccgagactta
gatgaacaactggttcacgcccaagaaacccggcggatactcgatcgcctctatggttat
accctgtcaccactgctgtggaaaaaaatcgccagaggcttgtcagcaggtcgggtgcag
tctgtagccgtaagattgatagtaaaccgagagagggagcgtcgcgccttccgacagggg
ggatattgggatctcaaagccttgctcgaacaaggtaaaaccgagtttgaggcgaaacta
attaccctgaatggggtaaaggtagccacaggtagcgacttcgacgaaagcactggtcaa
atcgcccaggggcgtaatgtagtcctactagactcagaccaagcccaagccctcaaggag
agactgagggagaaactctggtctgtgaggaatattgacgaacgctcagttactcgcaaa
cccgcgccgccatttaccacatcgactctccaacaggaggctaaccggaaactcagactt
agcgcccgccagactatgcaggtggctcagggactctatgagcggggttatattacctat
atgcggactgactctgtgcatttatcagagcaagccatagtagctgctagaaactgcgtt
gagcagaaatatggcaaagagtacctgagtccgaaaccgcgccagtacacgaccaaaagt
aagggggctcaagaagcccacgaagctatccgcccggctggaaattatttccgtactccc
caggaaactgagttaagtggtaatgacttgaaactgtatgacttaatttggaagcggacg
gttgcttctcagatggctgactctcgccaaactaatatctctgttgacttacaggtggaa
gatgcgggttttcgggcgaccgggaaacgtattgatttccctgggtttttgcgggcttat
gtagaggggtctgatgatcctgatgcggctttggaaaatcaagagctacctctaccacct
ttaaaagtgggtcagcatcctgattgtaaggatttggaggcgatcggacatgaaacccaa
cctccggcgcgctttacagaagcatctttggttaaaactctggaaagtgagggggtaggt
cgtccgagtacctacgcgagtgtgattggtacgattatcgatcgcggttatgctcaaatt
aagggtaatgctctgattcctacttttacggcttttgcggttaatagcctgctggaaaaa
cattttcccgatttggtggatatcggtttcaccgctcgcatggagaatactcttgatgag
atagccactggacaggcagaccagttaccttatctgcaaaagttctattccggtgacggg
gggctggaaaatcaggttaaggaacaggaaagccaaattgatgctaaggtagcccgcact
attgaattggaaaatttgggtgatgctactgatggcatgacttaccgtttgtgtttgggt
cgctttgggccttatatcgaggcacagaaggatgaggagattattactgcttctattcct
caagacctgactcctgctgacctgactcctgagttaattcaggagttgattggacaaaag
acggagggaccggaaaagctgggagtccatcccgaagcaggagaaccgatttttatgtta
attggtccctatggtccctatgtgcagttgggggaagagtcggaaactaataagaagccg
aaacgggtttctcttcccaaggggctggaaaaggatgctgtgactttggatgtggcggtg
tcgcttttgtctttacctcgccttttgggactgcatcccgaaacgggggctaaggttaag
gctgctattggtcgctttggtccttatgtggttcatgaaagtaaggaggctaaggattat
cgctctattaaggctcctgatgatgtgttgactattacttttgagcgggctttggaactt
ctggctcaacctaaggtgggacgcaggggaactaaaaaaactcttactcccctgcgagag
ttgggagaacacccggaagatggagaacctctcaatatctatgatggtcgctatggtccc
tatattaagcatggcaaaattaatgcttctttgcctaaagaccaggcgatcgaaactttt
accctggaacaggctttggaactattaaaggctaaggcggcttctggctccaagtccaag
tcgaagtcgaagtctactagcagtaccactgccaaaaagtccacgactgccaaaaagtcc
acgactgccaaaaagtccacgaccgccaaaaagtccacgaccgccaaaaagtccacgacc
gccaaaaagtccacgaccgccaaaaagtccacgaccgccaaaaagtccagcactaagggc
gaaacggaatag
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