Arthrospira platensis: NIES39_L00330
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Entry
NIES39_L00330 CDS
T02608
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
arp
Arthrospira platensis
Pathway
arp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES39_L00330 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arp03019
]
NIES39_L00330 (pnp)
03016 Transfer RNA biogenesis [BR:
arp03016
]
NIES39_L00330 (pnp)
Enzymes [BR:
arp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NIES39_L00330 (pnp)
Messenger RNA biogenesis [BR:
arp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NIES39_L00330 (pnp)
Transfer RNA biogenesis [BR:
arp03016
]
Prokaryotic type
tRNA degradation factors
NIES39_L00330 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KhpA-B_KH
KH_2
aRib
Motif
Other DBs
NCBI-ProteinID:
BAI92194
UniProt:
A0A9W3ZIH3
LinkDB
All DBs
Position
complement(4463129..4465291)
Genome browser
AA seq
720 aa
AA seq
DB search
MQEIDKSISFDGRDIRLKIGLLAPQAGGALLVESGDTSVLVTATRAEGRPGIDFLPLLVD
YEERLYAGGRIPGGFLRREGRPPDRVTLTSRLIDRPLRPLIPGWIRDDIQIVATTLSMDE
QVPPDVLAVTGASVAVLLARIPFYGPMAAVRVGLVGDDFIINPTYKEIRNGDLDLVVAGS
PQGVVMVEAGANELPEHDVIEAIDFGYEAVMDLIKAQTEIMQELNIDNPVEEPLPEDRTL
IEFIQERVTEPVKKVLGQFELNKDERDAALDVIKEEQIVSAIASMPEDDPISLFNIENPK
AVGMIFKDITKKLMRQQILTDGVRVDGRNLDQVRPVSCRVGLLPKRVHGSGLFNRGLTQV
LSIATLGTPGDAQDLDDLHPQDEKRYMHHYNFPPYSVGETRPMRSPGRREIGHGALAERA
LLPVLPSKEQFPYVIRIVSEVLSSNGSTSMGSVCGSTLALMDAGVPITKPVSGAAMGLIK
EGSEVRILTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKITGLSLDVVADAIAKAKPAR
LHILEKMLEVLPSPRPDLSPFAPRLLTLKIDPDLIGLVIGPGGKTIKGITEETGVKIDID
DDGTVTIASTDSENAARAYQIVQGMTRKLNAGDVYVGKVTRIIPIGAFVEVLPGKEGMIH
ISQLAEYRVPKVEDEVAVGDEVIVKVREIDPKGRINLTRLKIHPDEAAAAKAAASSGTVQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaattgataagtcaatatcctttgatggacgggatattagactcaagattgga
ttactagcgccgcaggcggggggagccctgttagtagaatcgggagatacatcagttctg
gtaacagcaactcgcgcagaaggaagaccgggaattgatttcctgcccctattggtagac
tatgaggaaagactttacgccggtggtcgtataccgggtgggtttttgcggagagagggt
cgcccccctgatcgggttactctcaccagtcgcttgattgaccgccccctacgtcctctg
attccgggttggattagagatgatattcaaatagtggccactactttgtcaatggatgag
caagtaccaccggatgttctggcggtaacaggtgcttctgtggcagtgttgttggcgcga
attccgttctatggaccaatggcggcggtgcgtgtgggattagtgggagatgatttcatt
attaatcctacctacaaggaaattagaaacggtgacctcgatttggtggtggctgggtct
ccccaaggtgtggttatggtggaggcgggggctaatgaattgccagaacatgatgtgatt
gaggcgatcgatttcggttatgaggcggtcatggatttgatcaaagcccaaactgaaatt
atgcaggaattgaacattgataaccccgttgaagaaccgctaccagaagatcggactttg
atagaatttatccaagaacgggttacagaaccagttaaaaaggttcttggtcaatttgag
ttgaacaaagatgaacgagatgctgctcttgatgtgattaaagaagagcagattgtcagt
gcgatcgcatcaatgccagaagatgaccccatcagcttgttcaatatcgaaaatcctaaa
gcggtggggatgatctttaaagacatcactaaaaaactcatgcgccagcaaatcctcacg
gacggagtgcgggttgatggtcgcaatttagaccaggtgcgtccggtgtcctgtcgggtg
ggattattaccaaaacgagtccatggtagtggtttatttaatcggggtctaactcaggtc
ctctctattgctactctggggactcctggagatgctcaagatcttgatgacctgcaccct
caagatgaaaaacgctatatgcaccactacaatttccctccctattctgtgggggaaaca
agacctatgcgatcgccaggacgtagagaaattggtcacggtgctttggcggaaagggct
ttattgcccgtgctaccatcaaaagagcaattcccctatgtgattcgcattgtctctgag
gtgctatcctctaatgggtctacttctatggggtccgtttgtggttcgactctggctttg
atggatgctggggttcccattaccaagccggtgagtggggcggcgatgggtttgattaaa
gaagggtcggaagttcgtatcctcaccgatatccaagggattgaagactttttgggagat
atggattttaaagtcgcaggtaccgatagcggtatcaccgccctacaaatggacatgaag
attaccggcttgtccttagatgtagtcgcagatgcgatcgccaaagctaaacccgcacgg
ctacatatcctcgagaaaatgttggaagtcctaccatcacctcgtcctgacctgtctccc
ttcgcacctcgcctactcacactcaaaattgatccagacttaattggtttggtcattggt
ccgggaggtaaaaccattaaaggaattaccgaagaaactggcgttaaaattgacatcgac
gatgatggcactgttaccattgcctctacagacagcgaaaacgccgcccgcgcttaccaa
attgttcagggtatgacccgcaagctaaacgccggagatgtctatgtagggaaagttacc
aggattattcctattggtgcctttgtggaagttctacctggaaaagaaggcatgattcac
atttcccaattagcagaataccgagtccccaaagttgaggatgaggtagcagtaggagat
gaggtcatcgtcaaagtccgcgaaattgaccccaaaggccgcattaacttaacccgcctg
aaaattcaccccgacgaagccgccgccgccaaggcagccgccagtagtggcactgtgcaa
tag
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