Limnospira platensis: NIES39_L02420
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Entry
NIES39_L02420 CDS
T02608
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arp
Limnospira platensis
Pathway
arp03420
Nucleotide excision repair
arp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES39_L02420 (pcrA)
03430 Mismatch repair
NIES39_L02420 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arp03400
]
NIES39_L02420 (pcrA)
Enzymes [BR:
arp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES39_L02420 (pcrA)
DNA repair and recombination proteins [BR:
arp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES39_L02420 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NIES39_L02420 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
Viral_helicase1
AAA_30
ResIII
AAA_22
PcrA_UvrD_tudor
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
BAI92402
LinkDB
All DBs
Position
4643060..4645399
Genome browser
AA seq
779 aa
AA seq
DB search
MESVDFLTSLNPSQRQAVEHFCGPMLVVAGAGSGKTRALTYRVANLIDNHKVNPENILAV
TFTNKAAREIKDRIESIFAQQQAQKKYQKPLSALEPAIQTQLRSQIYRKLTKHLWMGTFH
SLCARILRYDINKYQDEKGRQWKPNFSIFDESDVLALVKQIVTKTLNLDDKKFDPRKTRY
KISNAKNLGLSPQQYLQENPDYQGRVIAEVYSLYQDALAANNALDFDDLILVPVALFSQN
EQVLAYWHQKFCHILVDEYQDTNRTQYDLIRLLTTNGEPPPSFHNWQNRSIFVVGDVDQS
IYSFRMADYRIMLEFQQDFGDGLADDDSRTLIKLEENYRSRENILEVANHLIQNNTTRID
KILRPTRSPGVPVCCHKADDEMAEAHFVVDQIRTIINQNPEIGFGSFAILYRTNAQSRPF
EDVLRREDVHYNIVGGLKFYDRREIKDAISYLRVIANPADTVSLQRVINVPRRGIGRTTI
DGLNNAAQQLGVPLWEIISDQDSVNTITGRAAKSVNRFAQMIQSWRDRLETTTALDILDG
ILEDSGYFQDLKQQGTDEADNRLDNLRELCNAVSQFQEEEEDTSLQAFLARASLSSDLDN
LQEGQEAVSLMTLHSAKGLEFPIVFLVGLEQGLFPNFRSINDPLSLEEERRLCYVGITRA
QEQLFITHTSERRLWGYREPCVPSMFLAELPPDLVRGYKPLIRHQAAKNTTKNKATKGTI
KKSPQQWNVGDRVLHRSFGVGKITHIFGDHKGKLSIAVKFQGSSPKIINPSVVPLESLD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgtagacttcctaacttccctaaacccatcccaacgtcaagccgttgaacac
ttctgcggtccaatgttagtagtcgctggcgcaggttccggtaaaactcgcgccctcacc
tatcgcgtagccaacctgatcgacaatcataaagtcaaccccgaaaacatcctagccgtc
accttcaccaacaaagccgctagagaaatcaaagaccggatcgagtcaatttttgcccaa
cagcaagcccaaaaaaaataccagaaacccctatcagccttagaacccgccatccaaacc
caactgcgatcgcaaatttaccggaaactaaccaaacacctatggatgggaacctttcat
agcctctgtgcccgcattctccggtatgatatcaacaaataccaagacgaaaaaggccgt
cagtggaaacctaacttctcaatttttgacgagtcagacgtactagccctagttaagcaa
atcgtcaccaaaaccctcaacctagacgacaaaaaatttgacccccgcaaaactcgctat
aaaatcagtaacgccaaaaacctgggattgtctccccaacaatacctacaggagaacccc
gactatcaggggcgagtcattgcagaagtctatagtctatatcaagatgccctcgccgcc
aataacgccctagactttgacgacctcattctcgtccccgtagctttatttagccaaaac
gaacaagttttagcctactggcatcaaaaattttgccatattctcgtggacgaataccaa
gacactaaccgcacccagtatgacctgattaggctgttaacaactaatggagaaccgccg
ccatcttttcacaattggcagaatcggtctatttttgtggtcggggatgtagatcagtct
atttattccttccgtatggcagactatcggattatgctggaatttcaacaagattttggc
gatggtttagccgacgatgacagccgcaccttaattaaactagaagaaaactaccgatcg
cgagaaaacatcctagaagtagccaaccatctcattcaaaataacaccacccgcattgac
aaaattctgcgccctacgcgatcgcctggtgttcccgtctgctgtcataaagccgatgac
gaaatggcagaagctcattttgtagtcgatcagatcagaaccattatcaaccaaaacccc
gaaatcggcttcggtagttttgccattctctatcgcaccaacgcccaatctcgacccttt
gaggatgtattacggcgtgaagatgtacattataacattgtcggcgggctaaagttctac
gatcgccgagaaattaaagatgccatatcttatcttcgcgtcattgcgaaccccgctgat
accgtcagtttgcaaagggtcattaatgtacctcggcgcggtattggtcgcactaccata
gacggcttaaataatgccgcccaacagttaggggttcccctctgggaaattattagtgat
caagactccgttaataccattaccggacgcgcggctaaatccgttaatcgcttcgcccaa
atgattcaatcttggcgcgatcgcttagaaactaccacagccctagacattttagatggc
attctcgaagactctggctacttccaagacctcaaacaacaaggcactgatgaagcagat
aaccgcctagataacctgcgggaactctgtaacgccgtttcccaatttcaggaagaagag
gaagacaccagtttacaggcttttttagctcgtgcgtccctatcctcagatttagataat
cttcaggaaggacaggaagccgtttctctgatgaccctacactcagctaagggcttagaa
tttcccattgtcttcttagtcggtttagaacagggactctttcccaacttccgcagcatt
aacgaccctctcagtttagaagaagaacggcgactttgctatgtaggcatcacccgcgcc
caggaacagttatttattacccacaccagcgaaaggcgtttgtgggggtatcgcgaacct
tgtgttccttcgatgtttctagccgaattaccaccagacctagtgcggggatataaacct
ttgatccgccaccaagccgccaaaaacaccaccaagaataaagccaccaaggggactatc
aaaaaaagtccccaacagtggaatgtgggcgatcgcgttttacaccgcagttttggtgtt
ggtaaaatcacccacattttcggagatcacaaaggtaagctatctatagccgttaaattt
cagggttcgagccccaaaattatcaatcctagtgtagtccctttagagtccctagattaa
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