Limnospira platensis: NIES39_Q01420
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Entry
NIES39_Q01420 CDS
T02608
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
arp
Limnospira platensis
Pathway
arp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES39_Q01420 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arp03019
]
NIES39_Q01420 (recQ)
03400 DNA repair and recombination proteins [BR:
arp03400
]
NIES39_Q01420 (recQ)
Enzymes [BR:
arp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES39_Q01420 (recQ)
Messenger RNA biogenesis [BR:
arp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NIES39_Q01420 (recQ)
DNA repair and recombination proteins [BR:
arp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NIES39_Q01420 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
HEM4
Motif
Other DBs
NCBI-ProteinID:
BAI94150
LinkDB
All DBs
Position
complement(6420639..6422147)
Genome browser
AA seq
502 aa
AA seq
DB search
MTTVWLYFRALPLITAMIPPSETTTTEQVKNALKRFWGYDDFRPPQQEIVEAIIRGQDAL
IVLPTGGGKSICFQLPALLKNGLTIIVSPLVALMENQVKELHDRHLSAGIIHSQMSPRQR
RHTLHQLETNSLRLLYLSPETLLSKPVWNLINKPQVSINGLILDECHCLVQWGDTFRPDY
RRLGAVRPTLLKHKPPGSKIAIAAFTATADPTAQNTIKTVLQLQDPQEFLLSPYRDNLHL
KIRRVFTPMGRRKCLLSLMKQHQKQTGLIYVRTRRDSQELTAWLEKFGYKTAPYHAGLSA
EKRRKIESQWLEGKLQFVVCTSAFGMGINKPNVRWVVQFQPPLLLSEYIQEVGRAGRDGK
PAEALTILCEPTGWLYPEDRQRLSFLQDNFRQQMMAAKPLIKKLPQKGNLETVISRFPDS
AIALSLLHSQGKLEWVDLFNYQIKDTSLSLTENSNTVAIRQMTRYFATRDCRWKFILEAF
GFGTEAQSFRCGHCDNCDRHGS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacagtttggttatattttcgcgctttacccctaatcacagccatgattccacct
tctgaaaccaccacaactgaacaagtaaaaaacgccctaaaacgtttttggggttatgat
gattttcgcccccctcagcaggaaattgttgaggctattatcaggggtcaagatgccttg
attgttctgcccactggaggcggtaaatctatctgttttcaactgccagcgttattaaaa
aatggcttaaccataatagtttcgccgctggtagccttgatggaaaatcaggtaaaagaa
ttacacgatcgccatttaagtgccggtattattcatagtcaaatgtcccccaggcaacgg
cggcacactttgcatcaattggaaacaaacagcctgcgattgctctatttatcaccggaa
actttattaagtaagccggtgtggaatttaatcaataaaccccaggtttctattaatggt
ttgattttagatgaatgtcactgtttagttcaatggggcgatacatttagacctgattat
cgccgtttaggggcggtgcgtcccactttattaaaacataaaccaccaggtagcaaaata
gcgatcgctgcctttaccgctaccgctgatcccacggcccaaaacactattaaaacggtg
ttacagttacaagatcctcaagaatttttactgagtccatatcgagataatttacacctt
aaaattcgccgagtttttactcccatgggacggcgaaaatgcttgctaagtttgatgaaa
caacatcaaaagcaaaccggtttgatttatgttcgcacccgtcgagatagtcaagaattg
acagcctggctggagaaatttggctataaaactgccccttatcatgctggattatcggcg
gaaaaaaggcgcaaaattgaatctcaatggttagaaggcaagctgcaatttgtggtgtgt
acttctgcttttgggatgggaattaacaagcccaatgtccggtgggtggttcagtttcaa
ccacccctattactatcagaatatatccaagaagtaggaagggctggacgagacggaaaa
ccagcagaagccttgactattctctgtgaaccgacgggctggctgtatcctgaagataga
caaaggctgtcgtttttacaagataattttcgccaacaaatgatggccgctaaacccttg
attaaaaaacttccccaaaaaggcaatttagaaacagtgatcagtcgttttcccgacagt
gcgatcgccttgtctcttttgcattctcagggaaaattagagtgggttgatttgtttaat
tatcaaattaaagatacatcactatctttaactgaaaattctaacacagttgcgattcgc
caaatgactcgctattttgctacccgtgactgtcgctggaaatttatactagaggcgttt
ggctttgggacagaagcacaatcatttcgctgtggtcattgtgacaactgcgatcgccat
gggtcttaa
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