Arthrobacter sp. QXT-31: BWQ92_06935
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Entry
BWQ92_06935 CDS
T05056
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
arq
Arthrobacter sp. QXT-31
Pathway
arq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWQ92_06935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arq03019
]
BWQ92_06935
03400 DNA repair and recombination proteins [BR:
arq03400
]
BWQ92_06935
Enzymes [BR:
arq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWQ92_06935
Messenger RNA biogenesis [BR:
arq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWQ92_06935
DNA repair and recombination proteins [BR:
arq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BWQ92_06935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HDPD
Motif
Other DBs
NCBI-ProteinID:
APX01481
UniProt:
A0A1P8M094
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All DBs
Position
complement(1541509..1543716)
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AA seq
735 aa
AA seq
DB search
MANNQHAPVLSTATGPSGAGSEPGTATGTRSQALSVLRELVGRADADFHDGQFEAIEALV
DGGRRTLVVQRTGWGKSAVYFVASLLLRRRGAGPTLIVSPLLALMRDQVAAAARAGVRAV
AINSANQLEWDAVREQLAADQVDVLLVSPERLTNPSFRENQLPELIRRTGLLVIDEAHCI
SDWGHDFRPDYRRIADLITPLPDTVPVLATTATANSRVVHDIEEQLGDGVLTIRGALGRE
SLRLGVLALPDSRERLGWLLTHLGDLQGSGIIYTLTVSAAEDTARLLAEAGHEVLAYTGR
TDPADRERAEQLLKDNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGR
GAANADVLLLPGSEDREIWQYFATASMPSEEKATAVLTALAEAGSAVSTVALEARVDLRR
TPLELLLKVLAVDGAVERVGGGWRSTGMPWTYDAERYQRIAEARVDEQDSMVIYQDTSGC
RMEYITSVLDDETAAACGRCDNCAGRWFPADVAATATETAGQTLSRAGIVLESRLQWPSG
MDRLGVPVKGKIKPDENTADGRVLARLTDLGWGGALRELFAAGAADRPVDPGMLQACVQV
LREWGAGDSRIPGWSGAGRPAAIVSMPSRSRPELVDSLARGISQIGRIPYLGQLQLEHGG
PTGGRGGNSAYRLAGVWDRLVVGEALAAELAGLGGGSVMLIDDLVDSRWTVTVAGRALRR
AGAGAVLPLALAQAG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaccagcacgccccggtcctttccactgccaccggcccctctggtgccgga
agcgaacctggaacagccactggtacccggagccaggctctttcggtgctgcgcgagctg
gtcggtcgggcggatgccgacttccacgacggccagtttgaggccatcgaggcgctggtc
gacggcggccgccggacgctcgtggtgcagcggaccggctggggaaagtcagccgtttac
ttcgtggcgtccctgctgctccggcggcgcggggccgggcccacgctgatcgtttcgccg
ctgctggccctgatgcgcgaccaggtggcagctgcggcccgggccggtgtccgggccgtg
gccatcaactccgccaaccagctcgagtgggacgcggtgcgggagcagcttgccgccgac
caggtggatgttctgctggtctcccctgagcggctcaccaacccctccttccgggaaaac
cagctgcccgaactcatccggcgaacgggactgctggttatcgacgaggcccactgcatc
tcggactggggccacgacttccggccggactaccgccgcatcgcggacctcatcacgccg
ctgccggataccgtgcctgtactggccaccacagccactgccaactcccgggtggtccac
gacatcgaggaacagctcggcgacggcgtgctgaccatccgcggcgcattgggccgggag
tcgctgcggctcggagtcctggcgctgccggactcccgcgagcgtctcggctggctgctc
acgcacctgggagacctgcagggcagcgggatcatctacaccctgacggtttccgccgcc
gaagacactgcccggcttcttgcggaggccgggcatgaggtgctggcatacacgggacgc
accgaccccgcggaccgggagcgggcggagcagcttctgaaggacaaccaggtcaaggcg
ctcgtggccacgtccgcgctggggatgggcttcgacaagccggacctcggtttcgtggtc
cacctcggcgccccgtcctccccggttgcctactaccagcaggtgggcagggccggccgt
ggcgccgccaacgccgatgtcctgctcctgcccgggtccgaggaccgcgaaatctggcag
tactttgccacagcgtccatgccctccgaggagaaggccaccgccgtgctgaccgcgctg
gcggaagcaggttcggccgtgtccaccgtggctctggaggcgcgggtggacctgcgccgg
acgccgctggagctcctgctgaaggtgctcgctgtggacggcgcggtggaacgggtaggc
ggcggctggcggtccaccggcatgccgtggacctacgacgccgaacggtaccagcggatc
gcggaagcccgggtggacgagcaggactccatggtcatctaccaggacacgtccggatgc
cggatggagtacatcacctccgtcctcgacgacgagaccgcagctgcctgcggccgctgc
gacaactgcgccggccggtggttcccggccgacgtcgccgccacggcgacggagacggcc
gggcagaccctgagccgggccggcatcgtcctggagtcccggctgcagtggcccagcggg
atggaccgcctcggcgtgccggtgaagggcaagatcaaacctgacgagaacacagcggac
ggccgggtcctcgccaggctgacggatttgggctggggcggcgcgctgagggaacttttc
gcggccggggctgcggaccggcccgtcgatcccggcatgctccaggcctgtgtccaggtt
ctgcgcgaatggggagccggtgactcccggattccgggctggagcggcgcaggcaggccg
gcggccattgtcagcatgccctcccgcagcaggcccgaacttgtggactccctcgcgcgg
ggcatctcgcagatcggccgaatcccgtatctcggtcagctgcagctcgaacacggcggg
cccactggcggccgcggcggcaacagcgcctaccggctggccggggtgtgggaccggctc
gtggtgggggaggcgctggctgccgagctcgccggactgggcggcggcagcgtgatgctt
atcgatgacctcgtggacagccggtggaccgtcaccgtggcagggcgcgcgctcaggcgg
gccggggcgggcgcggtgcttccgctggcgctggcccaggccggctga
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