Arthrobacter sp. QXT-31: BWQ92_15855
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Entry
BWQ92_15855 CDS
T05056
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
arq
Arthrobacter sp. QXT-31
Brite
KEGG Orthology (KO) [BR:
arq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arq03016
]
BWQ92_15855
Enzymes [BR:
arq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BWQ92_15855
Transfer RNA biogenesis [BR:
arq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BWQ92_15855
Prokaryotic type
tRNA splicing ligases
BWQ92_15855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
APX02988
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Position
3500415..3501581
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AA seq
388 aa
AA seq
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METITGRLINWASILDDKTREQALTTSRLPFIYPHLALMPDAHLGKGATVGSVIPTLGAI
IPAAVGVDIGCGMIAVRTQYTLKDLPRDRKPLREGIERAIPLSAGHNNRKVTATAEPRIA
ELHRRAEKAGFNPAQYVAKWELQLGSLGSGNHFIEVCKDETDAVWLFLHSGSRGVGNKIA
QHHIRVAQGVARDKRITLEDPDLAYLEEGTPEFTRYIKELRWAQHFALLNREEMMDRVIR
QFSDWVGGTVKETERINCHHNFTQQETHYGKSVWVSRKGAIKAEAGDPGLIPGSMGTASY
VVEGLGNTASLNSSPHGAGREYSRNAARKAFSLAQLKEAMHGIEFRATEAFIDEIPAAYK
PIDQVMHDAADLVKVRHRLRQLVNVKGD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatcaccggccggctcatcaactgggcgtcaatcctggacgacaaaacccgc
gagcaggccctgaccacgtcccgcctgcccttcatctacccccatctggcgctgatgccg
gatgcacatctgggcaagggcgcaacggtgggatccgtcatcccgacgctgggcgcgatc
attccggccgccgtcggggtggacatcgggtgcggcatgatcgcggtgcggacccagtac
accctcaaggacctcccgcgggaccggaagccgctgcgtgaggggatcgagcgcgccatc
ccgctgtccgccggccacaacaaccggaaggtgacggccactgcggagccacgcatcgcc
gaactgcaccggcgcgccgaaaaggccggcttcaaccctgcgcagtacgtggcgaagtgg
gagctgcagcttggctcgcttggctccggaaaccacttcatcgaggtctgcaaggacgag
accgacgccgtctggctgttcctgcattccggctccagaggcgtcggcaacaagatcgcc
cagcaccacatccgggtggcgcagggcgtggcccgcgacaaacggatcacgctggaagac
ccggacctcgcctacctggaggagggcacgccggagttcacgcgttacatcaaggagctc
cggtgggcccagcacttcgccctcctgaaccgcgaggagatgatggaccgcgtcatccgc
cagttcagtgactgggtcggcggaacggtcaaggagacggagcggatcaactgccaccac
aacttcacccagcaggaaacgcattacggaaaatcggtctgggtgtcgcgcaagggcgcc
atcaaggcggaagcgggtgatcccggcctgattccggggtccatggggacggcgtcctat
gtggtggaagggcttggcaacaccgcctccctgaactcctcgccgcacggtgccggccgg
gagtattcgcgcaacgccgcacgcaaggccttctcgctggcccagctgaaggaagccatg
cacggcatcgagttccgggccacggaagcgttcatcgacgagatcccggcagcctacaag
cccatagaccaggtgatgcacgacgccgcagacctggtgaaggtgcggcaccggttgcgt
cagctcgtcaatgtcaagggggattag
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