Arthrobacter sp. QXT-31: BWQ92_16185
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Entry
BWQ92_16185 CDS
T05056
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
arq
Arthrobacter sp. QXT-31
Pathway
arq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWQ92_16185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arq03019
]
BWQ92_16185
03009 Ribosome biogenesis [BR:
arq03009
]
BWQ92_16185
Enzymes [BR:
arq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BWQ92_16185
Messenger RNA biogenesis [BR:
arq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWQ92_16185
Ribosome biogenesis [BR:
arq03009
]
Prokaryotic type
rRNA helicases
BWQ92_16185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
APX03041
UniProt:
A0A1P8M4R3
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All DBs
Position
3577874..3579904
Genome browser
AA seq
676 aa
AA seq
DB search
MPENHDDATTEAAEVTEAPETAAAAQAPAEAEEEGVRFADLGLDGRVLAALQDVGYEKPS
PIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSKLAELHDLNGPSRKTQALVLAPTR
ELALQVAEAFTSYAKHIDDFTVLPVYGGSAYGPQLAGLRRGAQVVVGTPGRVIDHIAKGS
LDLSELQYLVLDEADEMLRMGFAEDVEQIFQQTPEDRQVALFSATMPSQIRRMSKQYLND
PAEISVKSKTSTGTNIRQRYLQVMGPHKLDAMTRILEVEEFDGVIAFVRTKMATEDLADK
LKSRGFQAAAINGDIPQQQRERTVDALKEGRIDILVATDVAARGLDVERISHVVNYDIPH
DTESYVHRIGRTGRAGRAGDAILFMTPREKYLLRAIEKATRQTVEQMHLPTAETVNSLRL
GKFAERITETLESEDVSMFRDLIASYEEEHKVPAAEIAAALAVMAQGGQPLLVKELPAAP
EYQKRERSKDGFGSRGPTRQLTEGNATYRIAVGRRQRVMPGSIVGAIANEGGISSSQIGG
IDIRSDHSLVELPADLSQEQLRALSRTRIGGELIHLELDSGRRPSGDRGDRGGYQGGRGG
NFKGGGGFKKEFRKNDGERSSADRGGRAYSERSERGFGGDRGQSSDSRYGGHGDGARKPR
HGSEGGHRDFNRKGKW
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaatcacgacgacgccactaccgaagccgcggaagtaaccgaagctcccgaa
accgcggctgccgcccaggcccccgctgaggcggaagaagaaggcgtccgcttcgccgac
cttggcctcgacggccgggtcctcgccgccctccaggacgtcggctacgaaaagccctct
cccatccaggcagccacgattccgctgctgctggaaggccgcgacgttgttggcctggcc
cagaccggtaccggtaagactgcagcattcgcagtaccggcactgtccaagctggccgaa
ctccacgacctgaacggcccgtcccgcaagacgcaggccctggtcctcgccccgacccgc
gagctggcgctccaggttgccgaggcgttcacctcctacgccaagcacatcgacgacttc
acggtgctgcccgtctacggcggctccgcctacggcccccagctggcgggcctgcgccgc
ggcgcccaggttgttgtcggcaccccgggccgcgtcatcgatcacatcgccaagggctcg
ctcgacctctccgagctgcagtacctggtcctggacgaggccgacgaaatgctgcgcatg
ggcttcgccgaggacgttgagcagatcttccaacagacgccggaggaccgccaggtggcg
ctgttctcggccaccatgccgagccagatccgccggatgtccaagcagtacctcaacgac
cccgccgaaatctcggtgaagtccaagacgtccacgggcaccaacatccgccagcgctac
ctgcaggtcatgggcccgcacaagctcgatgccatgacccgcatcctcgaggttgaagag
ttcgacggcgtcatcgccttcgtgcgcaccaagatggccaccgaggacctcgccgacaag
ctgaagtcgcgcggtttccaggctgccgccatcaacggcgacatcccgcagcagcagcgt
gaacgcacggttgacgcgctgaaggaaggccggatcgacatcctggtggccaccgacgtc
gccgcccgcggcctcgacgtcgagcgcatcagccacgtggtcaactacgacatcccccac
gacaccgagtcctacgtgcaccggattggccgcaccggccgggcaggccgcgccggcgat
gccatcctgttcatgacaccgcgggagaagtacctgctgcgcgccatcgagaaggcaacc
cgccagacggtggagcagatgcacctgcccaccgctgagaccgtaaactcgctgcgcctg
ggcaagttcgccgagcgtatcaccgagaccctggagtccgaggacgtttcaatgttccgc
gatctcatcgcctcctacgaggaagagcacaaggtgccggcggcagaaatcgccgcggca
ctggcggtcatggcgcagggcggccagccgctcctggtcaaggaactgccggcagctccc
gagtaccagaagcgcgaacggtcaaaggacggcttcggttcccgaggcccgacccgccag
ctgaccgagggaaacgccacctaccggatcgccgtaggacgccgccagcgtgtcatgccc
ggttccatcgtgggcgccatcgccaacgagggtggcatctcctcgtcccagatcggcggg
attgacatccgctcggaccactcgctggtggagctgcctgctgacctgagccaggagcag
ctgcgcgccctgtcccgcacgcggatcggcggcgagctgatccaccttgagctggattcc
ggacgtcgtccctcgggtgaccgtggcgaccgtggtggctaccagggcggccgtggcggc
aacttcaagggcggcggcggcttcaagaaggagttccgcaagaacgacggcgagcgttcc
tcggctgaccgtggcggccgtgcgtacagcgaacgttccgagcgcggcttcgggggcgac
cggggccagtccagcgactcccgctacggcggccacggtgacggcgcacgcaagccgcgc
cacggcagcgagggcggccaccgcgacttcaaccgcaagggcaagtggtaa
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