Arthrobacter sp. QXT-31: BWQ92_18365
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Entry
BWQ92_18365 CDS
T05056
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
arq
Arthrobacter sp. QXT-31
Brite
KEGG Orthology (KO) [BR:
arq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arq03019
]
BWQ92_18365
Enzymes [BR:
arq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BWQ92_18365
Messenger RNA biogenesis [BR:
arq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BWQ92_18365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
AAA_23
nSTAND3
HA2_N
PhoH
Motif
Other DBs
NCBI-ProteinID:
APX03420
UniProt:
A0A1P8M5Z3
LinkDB
All DBs
Position
complement(4041426..4045430)
Genome browser
AA seq
1334 aa
AA seq
DB search
MTFHISYPAELPVSERREDLMAAIAANQVTIIAGETGSGKTTQIPKMCLELGLGENGLIG
HTQPRRLAARTVAERIASELGVDIGQEVGFQVRFTGEVSKSTKVKLMTDGILLAEIQRDK
LLRKYNAIIIDEAHERSLNIDFILGYLKRILPQRPDLKVIITSATIDPERFARHFGSDEE
PAPIVEVSGRTFPVEIRYRPLSQPAGGPSGDDEDNSSDDELEEDRDPLDAVCDAVDELAV
EAPGDILIFFSGEREIRDAADALQARIQSNRRLAGTEVLPLFARLSLQEQHRVFNPGGKR
RIVLATNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERVSQASANQRSGRCGR
VSDGIAIRLYSEEDFESRPLYTDPEILRTNLAAVILQMTAMGVARGPKDIEKFPFVEPPD
SRAINDGVTLLRELGALSAPQAGGGVPQAGSSAPQTAGTAGKRNGRNGGSGLTAVGQKLA
QLPVDPRLGRMIVEAGKRGCVREVMVLAAALTIQDPRERPTDKQQLAAEKHARFRDENSD
FTGYLNLWNYIHEKQQELSSTQFRRLCRNEFINYLRVREWQDLFTQLRQLARPLGISLDN
KREADPVGNHEGIHISLLSGLLSHIGILDERKREYAGARGSRFAIFPGSALFKKSPTFVM
AAELVETSRLWARVASKFEPAWAEQVAPHLIKHSYSEPHWSTKMGAVMAYEKVTLYGVPI
IAQRRVNYGKVDPVLARELFIRHALVQGEWKTHHKFFHRNRALLQEVEELEARMRRRDLL
VDDETLFEFYDARVGKDVVSERHFDKWWKDARQQEPALLDFDEALLLSEDAEALDESAYP
KTWLHKGFELPLSYEFHPVAPGSTPNPSDGVTAEVPVLFLNQLDDAPFRWLIPGQRVELV
TALIKSLPKQVRKSFVPAPDVARQAVAALESGFDPAEDELESSLELVLRRLKGQIIPPGS
WNWDAVPPHLRVSFKVVDSRGKVLDEGKDLEALQERLAPATRRAIAESLGATPATAGSGS
PNSRTPKKTRQQAAAPTSSPQAHAGFKEQSGLTQWQFGTLQREVSVTVKGHTVTGFPALV
DEGKSVGLRVFQTASEQLEAMRGGVIRLLALRVPAPDRYVLEHLNNTEKLTFSQNPHGSV
SALIADCVLAAVDKLTPAELPWDQAAFDALYEHVRAELIDTVFSVTAVVERILASTRRIE
KQLKGTTSLALISALNDIRSQLEQLVFPGFVAKTGYAQLSQLPRYLAAIEKRLEKLPGNV
QRDALNMAAVQQLEDDYDDAVSALLPGRRAGAELTQVRWMIEELRVSLFAVELGTAYSVS
EKRIRTALNKVMAA
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgacttttcacatctcctaccccgccgagctgccggtttccgagcgccgcgaggacctg
atggccgcgatcgccgccaaccaggtgacgatcatcgccggtgagaccggctccggaaag
accacccagattcccaagatgtgcctcgagctgggcctgggcgagaacggcctgatcggc
cacacccagccgcgccggctcgcggcgcggacggtggccgaacgcatagcctccgaactc
ggcgtcgatatcgggcaggaagtgggcttccaggtccgcttcaccggcgaggtgagcaag
tccaccaaggtcaagctgatgaccgacggcatccttctggccgagatccagcgcgacaag
ctgctccgcaaatacaacgcgatcatcatcgatgaggcccacgaacgcagcctgaacatc
gacttcatcctcggctacctcaaacggatcctgccgcagcggccggacctgaaggtcatc
atcacctccgccacgattgatccggagcgcttcgcccggcacttcggctcggacgaggaa
ccggcacccatcgttgaggtgtccggacgcaccttcccggtggagatccgctaccggccg
ctctcccagcctgccggcggcccgtccggcgatgacgaggacaactcctccgacgatgaa
ctcgaggaagaccgcgacccgctggacgccgtctgcgacgccgtcgacgagcttgccgtc
gaagcgcctggcgacatcctcatcttcttctccggcgagcgtgagatccgggatgccgcg
gacgccctgcaggccaggatccagtccaaccggcggctcgccggcaccgaggtcctcccc
ctgttcgcgcgcctgagcctgcaggagcagcaccgggtgttcaacccgggcggcaagcgg
cggatcgtgctggccaccaacgtggccgaaacctcgctgaccgtgccgggcatcaagtac
gtgatcgacaccggcactgcccgcatctcgcgctactcgcaccgcaccaaagtgcagcgg
ctgcccatcgaacgggtgtcccaggcgtcggcaaaccagcgttccggacgctgcggccgc
gtctcggacggcatcgccatccggctgtactccgaggaggacttcgagtcccggccgctc
tacaccgatccggaaatcctgcgcaccaacctggcggccgtcatcctgcagatgactgcc
atgggcgtggcacggggaccgaaggacatcgaaaagttccccttcgtggagcccccggac
tcgcgggccattaacgacggcgtgaccctccttcgtgagcttggcgccttgagcgcgccg
caggcaggcggcggtgttccgcaggcaggaagtagcgcaccgcagactgccggcaccgcg
ggaaagcgcaacggccgcaacggcggcagcggactgaccgccgtcggacagaaacttgcc
cagctgccggttgacccgcggctcggccgcatgatcgtggaagcgggcaagcgcggctgc
gtccgcgaagtcatggtcctggcggcggccctcaccatccaggacccccgggaacgcccg
acggacaagcagcagctggctgccgaaaagcacgcgcgcttccgtgacgagaactccgat
ttcaccggctacctgaacctctggaactacatccacgagaagcagcaggagctgtcctcc
acccagttccgccgcctgtgccggaacgaattcatcaactacctccgcgtccgtgagtgg
caggacctgttcacccagctccggcagctggcccggcccctgggcatcagtctggacaac
aagcgggaagcagacccggtgggcaaccacgagggcatccacatcagcctcctttccggg
ctgctgagccacatcggcatcctcgacgagcgcaagcgggaatacgccggcgcccgtggc
agccgcttcgccatcttccccggctcggcgctgttcaagaagtcgcccacctttgtcatg
gccgccgagctcgtggaaaccagccggctgtgggcgcgggtcgcctccaagttcgagccg
gcatgggccgaacaggtggctccgcacctgatcaagcacagctacagcgaaccccactgg
tccaccaagatgggcgccgtgatggcctacgaaaaggtcaccctctacggtgtgcccatc
attgcccagcgccgcgtcaattacggcaaggtcgatcccgtcctggcccgcgaactgttc
atccggcatgcgctggtccagggcgaatggaagacgcaccacaagttcttccaccgcaac
cgggccctgctgcaggaagtcgaagagctcgaggcgcggatgcgccgccgggacctgctg
gtggacgacgagacgctcttcgagttctacgacgcccgggtaggcaaggacgtcgtctcg
gaacggcacttcgacaaatggtggaaggacgcccggcagcaggagcccgcactcctggac
ttcgatgaggcgctgctgctgagcgaggacgccgaggcgctcgatgagtccgcctacccg
aagacgtggctgcacaagggcttcgaactgcccctgagctacgaattccatcccgtagcg
cccggctcgacacccaatccgtcggacggcgtcacggccgaagtgccggtcctcttcctg
aaccagctcgacgacgcacccttccgctggttgatccccggccagcgggtggagctcgtc
accgcgctgatcaagtcactgccaaagcaggtccgcaaaagcttcgttccggcccccgac
gtcgcccgccaggcggtggcagccctggaatccggtttcgaccccgccgaggacgagttg
gaaagctcactggagcttgtcctgcgccgcctgaagggccagattatccctcccggttcc
tggaactgggacgcggtcccgccgcaccttcgggtgagcttcaaggtggtggacagccgg
ggcaaggtgctggacgagggcaaggacctggaagcgctgcaggagcggctggcaccggcc
acgcgccgggccatcgcggaatcgctgggtgccacccccgccactgccggttcaggctcc
cccaactcgcggacgccgaagaagacccggcaacaggcggccgcccccacatccagcccg
caggcgcacgccggattcaaggaacagtccggcctgacccagtggcagttcggcaccctc
cagcgcgaagtcagcgttaccgtcaagggccacaccgtcacgggatttcccgccctggtg
gacgaggggaagtccgtgggcctgcgcgtcttccagacggcttccgagcagctcgaggcc
atgcggggcggcgtcatccggctcctcgctctgcgggtaccggcgccggaccgctatgtg
ctggagcacctgaacaacacggagaagctgacgttcagccagaacccgcacggttccgtt
tcggccctgatcgccgactgcgtcctcgcagcggtggacaagctcacgcccgcagaactt
ccctgggaccaggcagcgttcgacgctctgtatgagcacgtgcgggcggagctgatcgac
accgtcttcagcgtcactgccgtggtggagcgcatccttgccagcaccaggcggatcgag
aagcagctcaagggcaccaccagcctggctctcatcagcgcgctcaacgacatccgcagc
cagcttgagcagctcgtgttccccggctttgtggccaagaccggctatgcgcagctgagc
cagcttccgcgctacctcgccgccatcgaaaagcgcctggagaagctgcccgggaacgta
cagcgcgatgcgctcaacatggccgccgtccagcagctggaggacgactacgacgacgcc
gtgtcggcgctgctgcccggccgccgcgccggggcggagctgacgcaggtccggtggatg
atcgaggagctaagggtgagcctgttcgccgtcgagctcggcacagcctattccgtgtcc
gagaagcggatccggacggcactgaacaaggtgatggcggcataa
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