Arthrobacter sp. QXT-31: BWQ92_19915
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Entry
BWQ92_19915 CDS
T05056
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
arq
Arthrobacter sp. QXT-31
Pathway
arq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWQ92_19915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arq03019
]
BWQ92_19915
03009 Ribosome biogenesis [BR:
arq03009
]
BWQ92_19915
Enzymes [BR:
arq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BWQ92_19915
Messenger RNA biogenesis [BR:
arq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BWQ92_19915
Ribosome biogenesis [BR:
arq03009
]
Prokaryotic type
rRNA processing factors
BWQ92_19915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
APX03676
UniProt:
A0A1P8M6E6
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All DBs
Position
4360240..4363593
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AA seq
1117 aa
AA seq
DB search
MDNDQVIAENVEPAAADEAAAEAPKKVTRTRRKAAPKATAADAETAASETAAPVPAASET
VQPDTAASETPVAEVAAEAGEAPAKAPVRRSRARKKVAEEPLPAFAEGAGAEVDAQAAGA
QVAATEPAVTGPADEAAAEELAAESKPVRRRRTTKPKATEPAESPAESAGASAAGTAVAA
AEETQAVPETPAAAATPESAAAQEAGAVQETAAAQEAGVVQEAAAEEEAEEEAAAQSPLA
SLFLEPASVTSIIFQAPDLNTVIRPAAKEDAAAGEGEDELEDEGGRRRRRSRGRRGRSRS
DREITDGDEGAEVSDEAGEDEGAQPEDGVTSRRRRRRRRGDQDLELTGGGEDDPPNTVTR
VRAPRAISEAPASNRVTSVKGSTRLEAKKQRRRESRDTGRRRTVITEAEFLARRESVDRQ
MIVRQRDDRIQIGVLEDGVLAEHFVSKTQQDSLIGNVYLGKVQNVLPSMEAAFVDIGRGR
NAVLYAGEVNWDAATLEGKQRRIENALKSGDSVLVQVTKDPVGHKGARLTSQISLPGRYL
VYVPGGSMTGISRKLPDVERNRLKRILKDRLPEDAGVIVRTAAEGASEEELTHDINRLRA
QWEGIESQAKSTKVLAPELLYGEPDLTIKVVRDVFNEDFSKLIVSGDEAWDTIEAYVTYV
APDLVGRLEKWTKDEDIFSAWRIDEQIHKALDRKVFLPSGGSLVIDRTEAMTVVDVNTGK
FTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLVECL
GRDRTKHQVAEVTSLGLVQMTRKRMGTGLLEVFGEQCEVCAGRGVVTHDEPVEHRRANTV
AAEHHVHRAEVQPPARPERKRRRGKGGQQPEGAPAAPAALHHPDPSEAERHAKAEATRAA
LANIAAAAHAAHLHEEAAQTAAASAEAPRPAAPAAAAPESPVVHRAPETESISGRPGAVL
TFGGEKVILPFVDHSDEPPKEAPALTLDRLEEAFAHLGSPVAPAEKEEPREEAPAQRESE
QRESRQSESQPAAGQLAESSTALSRGRRPRRNRSASRPQGAANETSVEHHEVAPASAAGH
SHEAKAPETGDGSAAKAAPQPASEPIILGVGVPASEL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggataatgaccaggtcatagccgagaatgtcgaaccggctgccgccgatgaggccgcc
gccgaggctcccaagaaggtcaccaggacccgacgcaaggctgcacccaaggccacagca
gcggacgccgagaccgcggcgtcggaaaccgctgctccggtacctgcagcgtctgagacc
gtacagccagacaccgcagcgtctgaaactcctgtagccgaagtcgccgcggaggccgga
gaagcaccggccaaggccccggtccgccggagccgcgcacggaagaaggttgccgaggaa
ccgctgcccgcgttcgcggaaggtgccggggccgaagttgacgcacaggctgccggcgcg
caggtagccgccactgagccggcagtcacggggccggcagacgaggccgctgctgaggag
ctggccgccgaatccaagcccgtccgccgccgtcggacaacgaaacccaaagccactgag
cccgccgaaagccccgcggaatccgccggagcctccgctgcgggcactgccgtagcagcc
gctgaggaaacccaggctgttccggaaaccccggcagcagcggccactcccgaatccgct
gctgcgcaggaagccggtgctgttcaggaaaccgctgctgcgcaggaagccggtgttgtc
caggaagcggctgccgaggaggaagccgaagaagaggctgccgcgcagtcgcctctggct
tcgcttttcctggagcccgcctccgttacatcgatcatcttccaggcccccgacctgaat
acagtcatccgccccgccgccaaggaagacgcggccgccggggagggcgaggacgagttg
gaggacgagggtggccggcgccggcggcgcagccgcggccgccgcggccgcagccggtcc
gaccgtgaaatcaccgacggcgacgagggagcagaagtttccgacgaagccggcgaagat
gagggcgcccagcccgaagacggcgtgacgtcccgccgtcgccgccgccgccgccgcggc
gaccaggatctggaactgaccggcgggggagaagacgatccgcccaacacggtcacccgc
gtccgcgccccccgggccatcagcgaggcgccggcaagcaaccgcgtcaccagcgtcaag
ggatccacgcgcctcgaagccaagaagcagcgccgccgggaatcccgcgataccggacgc
cgccgcacggtcatcaccgaggccgagttcctggcccgccgggaatccgtggaccgccag
atgatcgtccgccagcgcgacgacagaatccagatcggcgtcctggaggacggcgtcctg
gccgagcatttcgtctccaagacgcagcaggactccctgatcggcaatgtgtacctgggc
aaggtgcagaacgttctgccgtccatggaggccgccttcgtggacatcggacgcgggcgc
aacgccgtgctgtacgccggtgaggtcaactgggatgcagccaccctcgagggcaagcag
cgccggatcgaaaatgccctgaagtcgggcgactccgtcctggtccaggtcaccaaggac
cccgtgggccacaagggcgcgcggctgaccagccagatctccctgcccggccggtacctt
gtatacgttcccggcgggtccatgaccggcatctcccgcaagctgcccgacgtcgaacgc
aaccggctcaagcgcatcctcaaggaccgcctccccgaggacgcgggcgtcattgtccgc
accgccgccgaaggcgcctccgaggaggaactgacccacgacatcaaccgcctccgtgcc
cagtgggaggggattgaaagccaggccaagtccaccaaggtcctcgcccccgaactgctc
tacggcgaaccggacctgaccatcaaggttgtgcgcgacgtcttcaacgaggacttctcc
aagctgatcgtgtccggcgacgaagcatgggacaccatcgaggcgtacgtcacctacgtc
gcaccggacctggtgggccggctcgaaaagtggaccaaggacgaggacattttctccgcc
tggcgcattgacgagcagatccacaaggccctggaccgcaaggtgttcctgccgtccggc
ggctccctggtcattgaccggaccgaggccatgactgtggttgacgttaacaccggcaag
ttcaccggcagcggcggcaacctcgaagagaccgtcaccaagaacaacctcgaggctgcc
gaggaagtggtccgccagctgcggctgcgcgacatcggcggcatcatcgtcatcgacttc
atcgacatggtgctggagtccaaccgcgacctggtcctgcgccgcctggtggagtgcctg
ggccgcgaccggaccaagcaccaggtcgccgaggtcacctcgctgggtctggtgcagatg
actcgcaagcgcatgggtaccggcctcctggaggtcttcggcgagcagtgcgaggtgtgt
gcgggccggggtgtggtcacacatgacgagccggtggagcaccgccgcgccaacaccgtg
gccgcggagcaccatgtccaccgtgcggaggtccagccccctgcccgtccggagcggaag
cgccgccgtggcaagggcggacagcagccagagggcgctccggccgcccctgccgcgctg
caccaccccgacccctcggaagcagaacgccacgccaaggctgaagccacccgcgccgcc
ctcgccaacatcgcggcagcggcgcacgccgcgcacctgcacgaggaggccgcgcagacc
gccgccgcgtcagcggaagcaccgcgtccggccgcgccagcggctgccgcaccggaaagc
cctgtggtgcaccgcgctcctgaaacggagagcatctccggccggccaggggcagtgctg
acttttggcggcgagaaggtgattcttccgtttgtcgatcacagcgatgagccgccgaag
gaagcgccggccctgacgctggaccgcctggaggaggccttcgcgcacctcggcagcccg
gttgcgcccgccgagaaggaggagcccagggaagaggcgccggcccagcgggaaagcgag
cagcgggaaagccggcagtcggaaagccagcctgctgcgggccagctggccgaaagctcc
accgccctgtcccgggggcgccgtccgcgacgcaaccgcagcgccagccgtccccagggc
gcagccaacgaaacatccgtggagcaccacgaggttgctcccgcatccgccgccgggcac
tcgcacgaggccaaggcaccggagacgggtgacggcagcgcggccaaggcggctccgcag
ccagccagcgaaccgatcattctgggggttggggtacccgcctcggaactctga
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