Arthrobacter sp. QXT-31: BWQ92_22230
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Entry
BWQ92_22230 CDS
T05056
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
arq
Arthrobacter sp. QXT-31
Brite
KEGG Orthology (KO) [BR:
arq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arq03019
]
BWQ92_22230
Enzymes [BR:
arq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BWQ92_22230
Messenger RNA biogenesis [BR:
arq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BWQ92_22230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
AAA_11
AAA_25
AAA_16
AAA_19
AAA_22
AAA_30
Helicase_RecD
NACHT
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
APX04086
UniProt:
A0A1P8M7K3
LinkDB
All DBs
Position
complement(4862498..4865245)
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AA seq
915 aa
AA seq
DB search
MTSALPLASSAPFNLDSIGSGLVFAESLGELAGVLQKQGAGGAAVVQAPPGTGKTTLVPP
LVANLAQGSTAEGQPRIVVTQPRRVAARSAARRLAALDGTKLGDRVGYTVRGERQAGPAT
LIEFVTPGILLRRLLADPGLEGTAAVILDEVHERGLETDLLVGLLAEVRQLRGDLMVVAM
SATLDAPRFAALLGGNEEGNEDGNMGGEHGGEADGGGPAPVVDCPSALHPLETAWAPAPA
ARLDGRGVTRAFLDHVADTAAASHAEALAADPGTDALVFLPGVWEVSHVAGQLRTRVGPG
VEILELHGQASPAAQDRAVSGRQPGEPSRIIVSTALAESSLTVPGVRLVVDSGLSREPRR
DAGRGMTGLVTVSCSRASAEQRAGRAARQGPGKVVRCYDQKTLGAAPAHQTPEIAVSDLT
GAALILACWGAPGGRGLALPDTPPPLAMADATEVLRELGAVGDDGHAMELGKALARIPAD
PRLGRALLVGSALLEERQAGSGSASPAHAGFGTAAEVVAAVAGDQRANGADLPRLVSTLR
SGKDPAARRWAEEARRLDTLARQAATGVGLPLVEVPSVELPAGSAEQVGMVVALAFPGRV
ARRVPGDGPERYLLTSGTRAGLPAGSPLAGHEWLAVAEVARADGRDAAGTGAVIRSAAPL
TADAAEAAAAHLLRDSVEAAFSQGKVTARRERRLGAIVLSSTPVPASAADGHAAVARAVE
EQGLGVIGWSTSADGLRRRLALLHRELGDPWPDMSEQALLARLDDWLGPELEALAGGVST
SGIDLADPIRRLLPWPDAARLGELAPEFLEVPSGSRVRIDYPQAEDDGGRPVVAVKLQEC
FGWDRTPRLADGKVAVQFHLLSPARRPLAVTDDLASFWSGPYAQVRAEMRGRYPKHPWPE
DPWTATATARTNARK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccgcgctccctctggcatcctccgcccccttcaacctggactccatcggctcc
gggctggtctttgcggagtcgctgggagagctggccggcgtgctccaaaagcagggcgcc
ggcggagcagctgtggtccaggcaccgccgggcaccggaaaaacaactttggtgcctccg
ctggttgccaaccttgcgcagggttccacagcggaggggcaaccgcgcatcgtggtcacc
cagccgcgccgcgttgcggcgcgttcggctgcgcggcggctggcggccctggacggaacg
aagctgggggacagggtgggctacaccgtccgcggcgaacggcaggccggccccgccacc
ctcatcgaatttgtgacgccgggaattctgctgcggcgcctgctggccgaccctggcctg
gagggtaccgctgccgtaatcctcgatgaagtgcacgaacgcggcctggaaaccgacctg
ctggtgggcctgctcgccgaggtgcgccagctgcgtggtgacctcatggtcgtcgccatg
tcggcgaccctggacgcgccgcggttcgccgccctgctcggtgggaacgaggaagggaac
gaggacgggaacatgggcggagagcacggcggggaggccgacggcggcgggccggctccc
gtcgtcgactgcccttctgcgcttcacccgctggagacggcgtgggcgcccgctcccgcg
gcgcgcctggacgggcgcggcgtgacgcgcgccttccttgaccacgtggcggacaccgcc
gcggcgtcgcacgccgaagctctcgccgccgatcccggcactgacgccctggtgttcctg
ccgggtgtttgggaagtgtcacacgtggctggtcagctgcgcacccgggtgggtcccggc
gttgaaatcctggaactccatggacaagccagcccagccgcccaggaccgtgccgtgtcc
ggccgccaaccgggggagccgtcacggatcatcgtatccacagcgctggccgaatcgtcc
ctgaccgtgcccggggtccggctggtggtcgactccgggctgtcccgcgaaccgcgccgc
gatgccggcaggggcatgacgggcctcgtcaccgtctcctgttcccgggcctccgcggaa
cagcgagccggacgggcggcacggcagggtccggggaaggtggtccgctgctacgaccag
aagacactcggggcggcacctgcacaccagactcccgagatcgcagtgtccgacctcacc
ggagcggccctgatcctggcatgctggggcgcaccgggcggacgcgggcttgccctgccg
gacacgccgcccccgctggcgatggcggacgccactgaagtgctgcgcgagcttggcgcg
gtgggggacgacggccacgccatggagctgggcaaggcactggcacgcatacccgccgat
ccccggttgggacgcgccctgctggtggggtcggcgctgctcgaggaacggcaggctggc
agcggttcggcgtcccccgcacatgctggttttggaacggcagccgaggtggttgccgcc
gtggcaggtgaccagcgcgccaacggagccgaccttccccgcctggtgtcgacgctacgc
tccggcaaggatcccgccgccaggcgctgggctgaggaggcccggcggctggacacgctt
gcacgccaggcagcgaccggcgtcgggcttcctttggtggaggttccctccgtggaactg
ccggcaggaagtgccgaacaggtcggcatggttgtggctctcgccttcccgggccgggtg
gcacgccgcgtgcccggagatgggccggaacgctacctgctgacctccggtacccgggcc
gggctgcccgccggcagccctctggccggacacgaatggctggccgtcgccgaagttgcc
cgggcggacgggcgggacgccgccgggaccggcgcggtcatccgctccgccgcaccgctc
acggcggacgcggccgaggccgccgcagcgcacctgctgcgcgactcggtggaggcggcc
ttcagtcaagggaaggtgacggcccgcagggagcgtcggctgggcgccatcgtcctgtcc
tccacgccggtgccggcatccgcggcggatggccacgccgccgtcgcccgggcagtggag
gagcagggactcggagttatcggatggtcgacgtcggccgatggactgcgacgccgtctc
gctctgctgcaccgggagctgggtgatccgtggcctgacatgtccgagcaggcgttgctg
gcacggctcgacgattggcttggtcccgagctcgaggcgctggccggaggggtgtcaacc
tccggcatcgacctggcggacccgattcgacgactgcttccctggcccgacgccgcccgg
ttgggtgagctcgccccggagttcctggaggtgcccagcggttcccgcgtcaggattgat
tacccgcaggcagaggacgacggcggcaggccggtggtcgcagtcaaactccaggaatgc
ttcggctgggacaggacaccgcggctggcggatggaaaggtggcggtgcagtttcacctg
ctgtcaccggccaggcggccgctggccgtcacggacgacctcgcctcgttctggtcaggg
ccgtatgcacaggtccgcgccgagatgcgtggccgttatcccaaacacccgtggccagag
gacccctggaccgcgacggctaccgcacggaccaacgcccgaaagtaa
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