Arthrobacter sp. Rue61a: ARUE_c12680
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Entry
ARUE_c12680 CDS
T02215
Symbol
gabD3
Name
(GenBank) succinate-semialdehyde dehydrogenase [NAD(P)+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr00250
Alanine, aspartate and glutamate metabolism
arr00310
Lysine degradation
arr00350
Tyrosine metabolism
arr00650
Butanoate metabolism
arr00760
Nicotinate and nicotinamide metabolism
arr01100
Metabolic pathways
arr01120
Microbial metabolism in diverse environments
Module
arr_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ARUE_c12680 (gabD3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ARUE_c12680 (gabD3)
00310 Lysine degradation
ARUE_c12680 (gabD3)
00350 Tyrosine metabolism
ARUE_c12680 (gabD3)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ARUE_c12680 (gabD3)
Enzymes [BR:
arr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ARUE_c12680 (gabD3)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ARUE_c12680 (gabD3)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ARUE_c12680 (gabD3)
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Motif
Pfam:
Aldedh
DUF1487
DUF3102
Motif
Other DBs
NCBI-ProteinID:
AFR28188
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Position
1359641..1361122
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AA seq
493 aa
AA seq
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MTVTVERESELLASVPTGLLINGQWRPAGSGKTFDVEDPATGKVLLSISDAGAEDGAAAL
DAAAAAQADWARTAPRERGEILRRAFELVTERAEDFALLMTLEMGKPLAEARGEVTYGAE
FLRWFSEEAVRVSGRYSAAPDGKNRLLVQKKPVGPCLLITPWNFPLAMATRKVAPAVAAG
CTMVLKPANLTPLTSLLFAQVMQEAGLPAGVLNVIQTSTAGAVTGPLIKDDRLRKISFTG
STPVGQALIREAADKVLRTSMELGGNAPFVVFEDADLDKAVEGAIAAKMRNMGEACTAAN
RFIVHESIADSFAEKFAAKIGALTTARGTEPESKVGPLIDGKARDGVHALVSEAVAGGAT
AVTGGAAVDGPGYFYQPTVLKNVAADARILQEEIFGPVAPIITFSTEDDAVRLANNTEYG
LVAYVFTKDLNRGLRISEKIETGMLGLNAGVISNAAAPFGGVKQSGLGREGGSEGIEEYL
YTQYVGIADPYAD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcacggttgaacgcgaaagcgaactgctggcttccgtccctaccggcctgctg
atcaacggtcagtggcgcccggccggatccggaaaaacctttgatgttgaggacccggca
acgggcaaggtcctgctcagcatctccgacgccggtgctgaggacggcgctgccgcgctc
gacgccgccgctgccgcccaggctgattgggcccgcaccgcaccgcgcgaacgcggcgaa
atcctgcgccgtgcgttcgaacttgtcaccgagcgtgccgaagacttcgcactgctgatg
accctggaaatgggcaagcccctggccgaagcccgcggtgaagtcacctacggtgccgag
ttcctgcgctggttctccgaggaagccgtccgcgtgtccggccgctattccgcagcaccg
gatggcaagaaccgcctcctcgtgcagaagaagccggtgggtccctgcctgctgatcacc
ccgtggaacttcccgctggccatggccacccgtaaggtagcccccgccgtcgccgctggt
tgcaccatggtgctcaagcccgcaaacctgaccccgctgaccagcctcctgttcgcccag
gtcatgcaggaagccggcctgcccgccggtgtcctcaacgtcatccagacctccactgcg
ggcgccgtcaccggcccgctgatcaaggacgaccgtctccgcaagatctccttcaccggc
tccaccccggtgggccaggcgctgatccgcgaagccgcggacaaggtcctgcgcacctcc
atggaactgggtggcaacgccccgttcgtggtcttcgaagacgccgacctggacaaggct
gttgaaggtgccatcgcagccaagatgcgcaacatgggcgaggcctgcaccgcagcgaac
cgcttcattgtgcacgagtccatcgctgattccttcgcggagaagttcgccgccaagatc
ggtgcactgaccactgcccgtggcaccgagccggagtccaaggttggcccgctgatcgac
ggcaaggcccgcgatggcgtgcacgcactggtttccgaagccgtagcgggaggtgccaca
gcagtcacaggtggtgccgccgtcgacggtcccggctacttctaccagcccaccgtgctg
aaaaacgtcgcagctgacgcccgtatcctccaggaggagattttcgggcccgttgcgccg
atcatcaccttctccaccgaagacgacgccgttcgcctggccaacaacaccgagtacggc
ctggttgcctacgtcttcaccaaggacctcaaccgcgggcttcgcatcagcgaaaagatc
gaaaccggcatgctcggcctcaacgccggtgtgatctccaacgccgctgcccccttcggt
ggcgtcaagcagtccggcctgggccgcgaaggcggctccgaaggcatcgaagagtacctc
tacacccagtacgtaggtatcgcggacccgtacgccgactag
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