Arthrobacter sp. Rue61a: ARUE_c12880
Help
Entry
ARUE_c12880 CDS
T02215
Symbol
csd1
Name
(GenBank) putative cysteine desulfurase Csd
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr00450
Selenocompound metabolism
arr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ARUE_c12880 (csd1)
Enzymes [BR:
arr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
ARUE_c12880 (csd1)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
ARUE_c12880 (csd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
AFR28207
LinkDB
All DBs
Position
1387598..1388884
Genome browser
AA seq
428 aa
AA seq
DB search
MHAMDNAEVLRIRNDFPVLDQLVNGKPLIYLDSGATSQNPLSVIEAEQEYYEQRNAAVHR
GAHHLAVEATEVFEDARQTVADFIGAQYEETVWTSNATEGLNLISYALSNAALWAAQGRG
GSALKDLAIGPGDEIVVTEMEHHANLIPWQELAFRTGATLKYIPVTDQGTLRLDAAADIV
GERTKLLAFTHASNVLGTINPVAELVAMARRVGALVVLDACQSVPHMAVDVKDLDVDFAV
FSGHKMLAPTGVGVLYGKQDLLDVMPPFLTGGSMITTVTMERAEYLPAPQRFEAGTQRIS
QAVALATAVNYLTETGIDRIHAWETALGQRLVKGLESIDGIRVVGPASGAERIGLAAFDV
AGVHAHDVGQFLDDRGIAVRVGHHCAQPLHRRLGLTATTRASTYLYNTTDDVDAFLDAVS
GVRAYFQA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccatggacaacgcggaggtgttgcggatccggaatgatttcccggtgctggac
cagctggtcaacggcaaacccttgatctacctcgattccggcgctacatcgcagaacccg
ctcagcgtgatcgaagctgaacaggaatactacgagcaacgcaacgccgccgttcaccgc
ggcgcacaccaccttgctgtggaagccaccgaagtatttgaggacgcccgtcagaccgtg
gcggactttattggtgcgcagtacgaggaaaccgtctggacctccaacgccacggagggc
ctcaacctcatcagctacgcgctgtccaacgctgccctgtgggctgcgcaaggccgtggc
ggttccgccctgaaggacctcgcgattggtccgggcgacgagatcgtggtcactgagatg
gagcaccacgccaacctcatcccctggcaggaactggccttccggacaggggccactctg
aagtacatccccgtgacggaccaggggaccctccgcctcgatgcagccgccgacatcgta
ggggagcgaaccaagctcctggccttcacccacgcctcgaacgtgctgggcaccatcaac
cccgtagccgagcttgtagccatggcccgacgcgtgggcgcgttggtggtcctggacgct
tgccagtccgttccgcacatggccgtagacgtcaaggacttggacgtcgacttcgccgta
ttctcggggcacaaaatgctggcgcccacaggagttggcgttctgtacggcaaacaggat
ctcctggatgtcatgccaccattcctgacgggcggctccatgatcaccacggtcaccatg
gaacgggcggagtacttgccggcaccgcagcggttcgaggccggaacccagcgcatctcc
caggccgtggcgctcgcaaccgccgtgaactacctcaccgagaccggcattgaccgtatt
cacgcttgggaaacggctcttggccagcgcctggtcaaaggccttgaaagcatcgacggc
attcgcgtggtgggcccggcatccggtgccgagaggatcggcctggcagccttcgacgtc
gccggtgtgcacgcgcacgacgtcggacaattccttgatgaccgcggcatcgccgtccgc
gtcggtcaccattgcgcccagccgctgcaccgccgcctgggcctgacggcaaccacccgg
gcgagtacctacctttacaacaccacggacgacgtcgacgctttcctcgacgcagtttcg
ggcgtcagggcctacttccaggcctga
DBGET
integrated database retrieval system
