Arthrobacter sp. Rue61a: ARUE_c15100
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Entry
ARUE_c15100 CDS
T02215
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr00300
Lysine biosynthesis
arr00470
D-Amino acid metabolism
arr01100
Metabolic pathways
arr01110
Biosynthesis of secondary metabolites
arr01120
Microbial metabolism in diverse environments
arr01230
Biosynthesis of amino acids
Module
arr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ARUE_c15100 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ARUE_c15100 (dapF)
Enzymes [BR:
arr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ARUE_c15100 (dapF)
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Motif
Pfam:
DAP_epimerase
RcsC
Motif
Other DBs
NCBI-ProteinID:
AFR28426
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Position
1642372..1643340
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AA seq
322 aa
AA seq
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MDETAAVPARQAATADVSVTPPSLAGLTFSKGHGTGNDFVLIADPGDAHEVTAEQVAQLC
DRHVGIGGDGLIRAVPSRFLPEGRVALEQDPQAEWFMDYRNGDGSLSEMCGNGVRVFVHF
LIAEGLVDLGPGQTLTIGTRGGVKKVVRTVNGYAVDMGPWEFIFPEEATSKAMDALVSAE
GLEVPRPGLSVSMGNPHTVVALAELSELSATQLFKAPVVDPKPANGTNVEFVVPAEPLVE
DGVGTITMRVHERGVGETQSCGTGACAAAVAIRHWAGDTAPNDWHVKVPGGVVGVKFFPG
AGGREHVELSGPAVIVATGTLS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaccgccgcagttcccgcccggcaggccgcaactgccgacgtgtcagtgaca
cctcccagcctcgcaggcctgacattttccaagggtcacggaacgggcaatgactttgtg
cttatcgctgatcccggggacgcccatgaggtcacggctgagcaggtggcgcaattgtgc
gaccgccatgtgggcatcgggggtgacggccttatccgggcggtcccgtcccgctttctc
ccggaaggccgcgttgccctggagcaggatccccaagcagagtggttcatggactaccgc
aatggggatggttcgctttccgagatgtgcggcaatggcgtgcgcgtcttcgtccatttt
ctgatcgcggagggtttggtggacctggggcccggtcagaccctcactatcggcacacgc
ggcggcgtaaaaaaggttgtacgcacggtcaacggctatgccgtggatatgggcccgtgg
gagttcatcttccccgaggaagccaccagcaaggccatggatgcactggtcagcgccgag
ggcctggaagtgccaaggcccggcctgtcagtcagcatgggcaatccccacacggtagtt
gcccttgcggaacttagcgagctttcagccacacaactgttcaaggctcccgtggtggat
cccaagcccgccaatggaaccaacgtcgagtttgtggtccccgccgagccgctggtggag
gacggtgtaggaaccatcaccatgcgcgttcacgagcgtggcgtgggggagacacagtcc
tgcggcacgggcgcgtgtgccgccgccgtcgcgatccgtcactgggcgggggacacagcc
ccgaacgactggcacgtcaaagtgccgggcggcgtcgtgggtgtgaagttcttccccggg
gcaggcggccgcgagcatgtggaacttagcggcccggccgtgattgtggctactgggacg
ctttcctga
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