Arthrobacter sp. Rue61a: ARUE_c23970
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Entry
ARUE_c23970 CDS
T02215
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr03030
DNA replication
arr03430
Mismatch repair
arr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ARUE_c23970 (holA)
03430 Mismatch repair
ARUE_c23970 (holA)
03440 Homologous recombination
ARUE_c23970 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arr03032
]
ARUE_c23970 (holA)
03400 DNA repair and recombination proteins [BR:
arr03400
]
ARUE_c23970 (holA)
Enzymes [BR:
arr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ARUE_c23970 (holA)
DNA replication proteins [BR:
arr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ARUE_c23970 (holA)
DNA repair and recombination proteins [BR:
arr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ARUE_c23970 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AFR29298
LinkDB
All DBs
Position
complement(2645325..2646251)
Genome browser
AA seq
308 aa
AA seq
DB search
MGPEEYLGIRAMDGIRSHVRTATPDVELSRLNAGAYEAGSLAMTVTPSLFGEGKLIEVEG
LEAMNDAFLSDGLAYLQHPDPDVVLVLRHAGGVRGKKLLDAVKSAGWPVIDCQPLKKDSD
KTAFVVSEFRAGGRRIEGEAVQALVNAVGANLSELAAACSQLIADATTAVTAETVERYYG
GRVEATAFKVADAAMAGNGPVALSTLRHALATGVDPVPLVAALAAKLRTLAKVAGANGSP
ATIAKNLGMQPWLVEQAQRDVRRWTPEGLIRSIQVIAEADAQVKGESRDPVYAVEHAVTV
IATSASRR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggcccggaagagtatcttggtatccgcgccatggacggcatccgtagccacgtgcga
accgctacaccggatgttgagctcagccggttgaacgcgggtgcctacgaggccgggtcg
ttggcgatgaccgttaccccgtctctcttcggcgagggcaagctcatcgaggtcgagggt
ctcgaggccatgaatgacgccttcctgtccgacggattggcctaccttcagcatccggac
ccagacgttgtcctcgtccttcgccatgccgggggagtccggggcaagaagctgctcgac
gccgtcaagtccgccggatggcccgtcatcgattgccaacccctgaagaaagactctgac
aagaccgcgtttgtcgtctccgagttcagggccggcggacgacgcattgagggcgaggct
gtccaggccttggtgaatgcggtgggcgccaatctttccgagcttgctgctgcctgcagc
cagttgattgccgacgccaccacagccgtcacagccgagactgttgagcgctactacggc
ggccgagttgaagctacggctttcaaggtggccgatgctgccatggccggcaacggaccg
gttgcactgtccaccctgcgccacgccttggccaccggcgttgatcccgttcccctggtt
gcagcactggctgccaagctgaggaccttggccaaagttgcgggtgccaacggttcaccc
gccaccatcgccaaaaacctgggtatgcagccgtggcttgtggaacaggcccagcgtgat
gtccgccgctggaccccggaaggcctgatccgctccatccaagtcattgcagaagccgat
gcccaagtgaagggcgagtcgcgggaccctgtctacgcggttgagcacgcggtcacggtc
atcgccacctcggccagtcgccgctga
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