Arthrobacter sp. Rue61a: ARUE_c28890
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Entry
ARUE_c28890 CDS
T02215
Symbol
uvrD
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr03420
Nucleotide excision repair
arr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ARUE_c28890 (uvrD)
03430 Mismatch repair
ARUE_c28890 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arr03400
]
ARUE_c28890 (uvrD)
Enzymes [BR:
arr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ARUE_c28890 (uvrD)
DNA repair and recombination proteins [BR:
arr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ARUE_c28890 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ARUE_c28890 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
HHH
C1_1
Zn_ribbon_RPB9
Glyco_hydro_75
PHDvar_NSD
Motif
Other DBs
NCBI-ProteinID:
AFR29775
LinkDB
All DBs
Position
complement(3190204..3192336)
Genome browser
AA seq
710 aa
AA seq
DB search
MTEGIFDGGGSLEERILSGLDEEQREVASTLTGPMCVLAGAGTGKTRAITHRIAYGVHSG
VYSPQRLLAVTFTARAAAEMRSRLRDLGVANVQARTFHAAALRQLQFFWPQAIGGTLPNL
LDHKANMIAEASRRLRLSTDRASIRDLAAEIEWAKVSMLTPANYLENAQDRGTPGGFDLT
AVARVFQAYEDIKTDRNVIDFEDVLLITVGILQEDPKVAATVREQYRHFVVDEYQDVSPL
QQRLLDLWLGGRNELCVVGDASQTIYSFTGASPKHLLGFKAQFPGATVVKLIRDYRSTPQ
VVKLANDLLGSRRSGGPVADAAWAPPLKLVAQRPSGPEPRFMECPDDEAEAAVVAGRIQE
LLNTGVKASEIAILFRTNGQSEAYEQALASAGIGYQLRGGERFFARKEVRDAILQLRAAT
RAVAEGPQEALGQIVRDIVASLGYTDAAPHSGGALRERWESLAALVALADELAVSRGESF
TLAEFVNELQERSVAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLSEGLMPISFADTPED
VDEERRLLYVGITRAREHLNLSWSTARTPGGRANRKPSRFLDGLRPNSVASANARSKTGP
TRRKAAAPASCKVCGSMLASGAERKVGRCNQCPPTYEEQTFDALRQWRRDEAQTADVPAY
VVFTDATLTAIAEAKPSSLEELAGLAGIGPSKLERYGEAVLAVLAESSEL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaggaattttcgacggcggaggctcactggaggagcgcatacttagcggcctg
gatgaagagcaacgcgaagtagccagtactttgacgggacccatgtgcgtcctcgcgggg
gcaggcacgggaaaaacacgcgccatcactcatcgcattgcctatggggtccactccggg
gtgtacagcccccagaggcttctggccgtgacctttaccgcccgggccgcagctgagatg
cgcagcaggcttcgcgatcttggtgttgccaacgttcaagcccgtaccttccacgccgcc
gctttgaggcagttgcagttcttttggccgcaggcaatcggcggcactctacctaatctg
ctggaccacaaggccaacatgatcgccgaggcctcccgcaggcttcgcctcagcactgac
cgtgcatccatcagggaccttgcggccgagattgagtgggccaaggtgtccatgctgacg
cccgccaactacctggagaatgcccaagaccgtggtactcccggaggtttcgacctcact
gcggtcgcccgggtgttccaggcatacgaggacatcaaaaccgaccggaacgtcatcgac
tttgaagacgttctcctcatcacggtagggatcctccaggaggatccgaaagtagcggca
acagtccgggaacaataccgccacttcgtggtggacgaataccaggacgtctcgcccctg
caacaacggctgttggatttgtggctcggaggccggaacgagttgtgtgtggtgggcgat
gccagccagaccatctactccttcaccggagcttcacccaagcacctgctggggttcaaa
gcacagttcccgggagccacagtcgtcaagctcattcgtgactaccggtccaccccgcaa
gtggtgaagctcgccaacgacctcctcggctcccgacgaagcggcggcccggtggcagat
gcagcgtgggcgcctcccctcaagctcgtcgcgcagcggccctccggaccggaaccgcgg
ttcatggagtgcccggatgacgaggccgaggcagccgtggtggcaggccgaatccaggag
ctgctcaataccggagtcaaggccagcgagattgctatcttgttccgcaccaacggccag
tctgaagcgtatgagcaagcccttgcttcagccgggattggctaccagcttcggggaggg
gaacggttcttcgcacgcaaggaagtccgtgatgcgatcctccagttacgggcggcaacc
cgcgccgtggccgaaggaccccaggaagcactgggccaaatcgttcgggacatcgttgcg
tcactcgggtatacggatgccgccccccatagcggaggtgcactgcgagagcgttgggaa
tccctggcagctttggtcgcactggctgatgagcttgccgtcagccgcggagagtccttc
accctggctgagttcgtcaacgagctacaagagcgatcggtcgcgcagcacgcgccaacc
gttcaaggtgtgactctggcttcccttcacgccgccaagggcctggaatgggatgccgtg
ttcctggtgggcctcagcgaaggcctcatgcccatttccttcgcagacaccccggaggac
gttgacgaagaacgcaggttgctctatgtcggcatcacccgcgctcgcgagcatctgaat
ctctcatggtccacagcccgaacgccgggtggccgcgccaaccgcaagccgtcaaggttc
cttgacggacttcgccccaattccgtggcttccgccaacgcacgcagcaagacaggtccc
acccgacggaaagctgccgcaccggcgtcgtgcaaggtctgcggaagcatgctggcaagt
ggagccgagcggaaggtggggcgctgtaaccagtgcccgcccacatatgaggaacaaacg
ttcgatgcgctgaggcagtggcgcagggacgaagcccagacggccgacgttccggcctat
gttgtcttcacggacgctacgctcacggcaatcgccgaagccaagccttcatcgcttgag
gaactggctggcctggctgggattggcccatccaagcttgaacgctatggcgaagctgtc
ctggccgtactcgctgagagttcggagctctga
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