Arthrobacter sp. Rue61a: ARUE_c31050
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Entry
ARUE_c31050 CDS
T02215
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ARUE_c31050 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arr03021
]
ARUE_c31050 (rpoC)
03400 DNA repair and recombination proteins [BR:
arr03400
]
ARUE_c31050 (rpoC)
Enzymes [BR:
arr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ARUE_c31050 (rpoC)
Transcription machinery [BR:
arr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ARUE_c31050 (rpoC)
DNA repair and recombination proteins [BR:
arr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ARUE_c31050 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
Motif
Other DBs
NCBI-ProteinID:
AFR29990
LinkDB
All DBs
Position
complement(3412289..3416188)
Genome browser
AA seq
1299 aa
AA seq
DB search
MSSESSFGLMQIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDTESRHAELPNLQVEHDLEKKQMVDNRDSDIATIARDLEDE
LARLEGEGAKAADKKKARDSADRQMANVRKRADADIERLEQVWDRFKNLKVADLEGDEGL
YRELRDRYGLYFEGSMGAEAIKKRLETFDMQAEAESLRDTIQNGKGQRKTRALKRLKVVN
AFLTTNNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLYHLTTKRVGSAGEGR
IFSSVSEAIMAYDARDLHLNSQVKIRLDDFVPYAGWEAPEGWEPGQPALVETSLGQVIFN
QTLPEDYPWVEAVADKGELSRIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIEVPTSKPAILAGYENMAAKIQGQYDKGLIDDDERRQELIEIWNKATNEIAQAMRDSLS
PMNTINRMVSSGARGNWMQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLVTPIAVPDSNGELVLDE
NVENSAYARTLAVDVVDAQGNVLAAGGTDCGDVVIDQLLAAGITEVKVRSVLTCESKVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAVSAGGGDDITQGLP
RIQELFEARTPKGVAPIAEAAGRITIEESERQMRLVITPDDGSEEIAYPVLRRSRLLIED
GEHVSVGQKLINGPVDPKQVLRIMGPRAAQKFLVDEVQGVYRSQGIGIHDKHVEVIVRQM
LRRVTVIESGDSDLLPGELAERARFEDENRRVVSEGKAPASGRPELMGITKASLATESWL
SAASFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKAS
LFTGPSAFTDFSYDALGGDGAPEFHAIPLDDYDLGNDFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcagatcggcctcgccaccgcggaagacatc
cgcggatggtcttacggtgaggtcaagaagccggaaaccatcaactaccgcacgctcaag
cctgagaaggacggcctcttctgcgagaagatcttcggcccgtcccgcgactgggaatgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatttgcgagcggtgtggcgtt
gaagtcacccgcgccaaggtgcgtcgtgagcgcatgggccacatcgagttggccgcgcct
gtaacccacatctggtacttcaagggcgttccttcgcgcttgggctaccttttggacctg
gcaccgaaggaccttgagaaggtcatctacttcgccgcctacatgatcaccagcgttgac
acggaaagccgtcacgccgaattgccgaacctccaggtcgagcacgacctcgagaagaag
cagatggtggacaaccgcgacagcgacatcgccacgatcgcccgcgaccttgaagacgag
cttgcccgtcttgaaggcgaaggcgccaaggctgccgacaagaagaaggcccgcgactct
gctgaccgtcagatggcgaacgtccgcaagcgtgccgacgccgacatcgagcgccttgag
caggtttgggaccgcttcaagaacctcaaggtcgctgaccttgaaggcgacgaaggcctg
taccgcgaacttcgcgaccgttacggactgtacttcgagggctccatgggtgccgaggcc
atcaagaagcgcctcgagacctttgacatgcaggctgaagctgagtcattgcgcgacacc
atccagaacggcaagggccagcgcaagacgcgtgccctgaagcgcctgaaggttgtcaac
gcgttcctgaccaccaacaacagcccgctcggcatggttctcgacgctgtcccggtgatc
ccgccggaactgcgcccgatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctctaccgccgcgtgatcaaccgcaacaaccgcctcaagcgcctgcttgacctc
ggtgctccggagatcatcgtcaacaacgagaagcgcatgcttcaggaagctgttgacagc
ctcttcgacaacggtcgtcgtggccgccccgttacgggtccgggcaaccgtcccctgaag
tccctgagcgacatgctcaagggcaagcagggtcgtttccgccagaacctcctcggcaag
cgcgttgactactccggtcgttcggtgatcgtcgtcggcccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggccttggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagtcggccaagcgcatggttgagcgttaccgt
ccgcaggtttgggacgtgctggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacctaccctgcaccgcctcggtatccaggccttcgaaccccagcttgtggaaggcaag
gcaatccagcttcacccgttggtttgtggcgccttcaacgctgacttcgacggcgaccag
atggcagtccacctgccgctgagcccggaagcccaagccgaagcacgcatcctgatgctg
tcctcgaacaacatcctgaagccgtctgatggccgtccggtgacccttccttcgcaggat
atgatcatcggcctgtaccacctgaccaccaagcgcgtcggctccgccggcgaaggccgt
atcttctcctcggtttcggaagccatcatggcgtacgacgcccgtgatctgcacctgaac
tcccaggtcaagatccgtttggacgacttcgtgccttacgcaggatgggaagctccggaa
ggttgggagcccggtcagccggctctcgttgaaacctccctgggccaggtcatcttcaac
cagacgctgcctgaggattacccgtgggttgaggctgttgcggacaagggcgaactgtcc
cgtatcgtcaacgacctcgcagagcgctacccgaaggttgttaccgcggcaacgctggac
aacctgaaggatgccggcttctactgggccacccgttcgggtgtcacggttgccatctct
gacatcgaggtgcctacttccaagcctgccatcctggccggttacgagaacatggccgcc
aagatccagggccagtacgacaagggcctgatcgacgacgacgagcgtcgccaggaactg
atcgaaatctggaacaaggcaaccaacgaaatcgcccaggcgatgcgtgacagcctgtcc
ccgatgaacaccatcaaccgcatggtgtcctccggtgcacgtggtaactggatgcaggtc
cgccagattgcgggtatccgtggtcttgtggccaacccgaagggtgagatcattcctcgc
ccgatcaagtcctcctaccgcgagggcctgtcggttctggaatacttcatcgccacgcac
ggtgcccgtaagggtctggccgataccgctctccgtaccgccaactcgggttacctgacc
cgtcgtctggtggacgtttcgcaggacgtcatcgtccgcgaagaggactgtggtaccgaa
cgcggtctggtcaccccgatcgccgtgccggattccaacggtgagctcgtcctggacgag
aacgtcgagaacagcgcctacgcacgtacgctggctgtcgacgtcgtcgatgcccagggc
aacgtcctggctgccggcggcaccgactgcggcgacgtcgttatcgaccagctgctggct
gcaggcatcaccgaggtcaaggtccgctccgtactcacctgtgagtccaaggtgggtacc
tgtgcactctgctacggccgttcgctggccaccggcaagaccgtggacatcggcgaggcc
gtgggcatcatcgccgcacagtccatcggtgagcccggtacacagctgaccatgcgtacg
ttccacaccggtggtgctgtttccgctggtggtggcgacgacatcacccagggtctgccc
cgtatccaggagctcttcgaagcccgtactccgaagggtgtggcaccgattgctgaagca
gccggccgcatcaccattgaagagtccgagcgtcagatgcgcttggtcatcactccggac
gatggttccgaagagattgcctacccggtgctgcgccgttcccgtctcctcatcgaggat
ggcgagcacgtcagcgtcggccagaagctgatcaacggtccggtggacccgaaacaggtt
ctgcgcatcatgggtcctcgtgctgcacagaagttccttgtggacgaagtacagggcgtt
taccgcagccagggtattggtatccacgacaagcacgtcgaggttattgtccgccagatg
ctgcgtcgcgttaccgtcatcgagtccggcgactccgacttgctccccggtgagcttgca
gagcgcgcccgcttcgaggacgagaaccgccgcgtcgtgtccgagggcaaggcaccggca
tccggtcgtccggaactcatgggtatcaccaaggcttccttggctaccgagtcctggctg
tcggctgcttccttccaggaaaccacccgcgtcctgacgcaggcggccatggaaggcaag
agcgatcctctgctcggcctcaaggaaaacgtcatcatcggtaagctcatcccggctggt
acgggtctgccccgctacacagaggtcactgtggagccgacggaagaagcgaaggcaagc
ctgttcacgggccccagcgctttcaccgacttctcctatgacgccctgggtggcgacggt
gctcccgagttccacgccatcccgctggatgactacgatctcggcaacgacttccgctag
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