Arsenicicoccus sp. oral taxon 190: ADJ73_04090
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Entry
ADJ73_04090 CDS
T04014
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ars
Arsenicicoccus sp. oral taxon 190
Pathway
ars03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ADJ73_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ars03400
]
ADJ73_04090
Enzymes [BR:
ars01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ADJ73_04090
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ADJ73_04090
DNA repair and recombination proteins [BR:
ars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ADJ73_04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AKT50692
UniProt:
A0A0K1F8F8
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All DBs
Position
1:complement(853934..854794)
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AA seq
286 aa
AA seq
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MPELPEVQALVDFLTERIVDDAITAVELGSFSVLKTYAPAPQAFAGLVVSGVSRHGKFVD
IDCDGLHLVFHLAKAGWLRWYDEVPRAALRPNKSPVAVRVRMLSGGGFDLTEAGTRKSLA
AYIVDDPAQVPGIERLGPDPLADDFTLDVFAQVLAGRSAQIKGVLRDQSMIAGVGNAYSD
EILHVARLSPFAKASALDEDQVARLYEALRETLRSAVVTASGKPAAELKDAKRAGMRVHG
RTGEPCPACGDTVREVSFADSSLQYCATCQTGGKPLADRRTSKFLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtccaggccctggtcgacttcctgaccgagcggatcgtcgac
gacgcgatcacggccgtcgagctggggtccttctcggtgctcaagacctatgcgcccgcg
ccgcaggccttcgccgggctggtcgtgtcgggggtctcgcggcacggcaagttcgtggac
atcgactgcgacgggctgcacctggtcttccacctcgccaaggccggatggctcaggtgg
tatgacgaggtcccgcgtgctgccttgcgccccaacaagtctccggtggcggtgcgggtg
cggatgctgtccggcggggggttcgacctgacggaggcgggcacccgcaagtcgctggcc
gcgtacatcgtcgacgaccccgcgcaggtgccggggatcgagcggctcggccccgacccg
ctggcggacgacttcacgctcgacgtcttcgcgcaggtgctggccggccgctcggcccag
atcaagggcgtgctgcgggaccagtcgatgatcgccggcgtcggcaacgcctacagcgac
gagatcctccacgtcgcccggctgtcgcccttcgccaaggcgtcggcgctcgacgaggat
caggtggcgcggctctacgaggcgctgcgggagaccctgcggtcggccgtcgtcaccgcg
tccggcaagccggccgccgagctcaaggacgccaagcgggccgggatgcgggtgcacggc
cggaccggcgagccgtgcccggcgtgcggcgacacggtgcgggaggtgtccttcgccgac
tcctcgctgcagtactgcgccacctgccagaccggcggcaagcccctcgcggaccgccgc
acctccaagttcctgaagtag
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