Arsenicicoccus sp. oral taxon 190: ADJ73_08025
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Entry
ADJ73_08025 CDS
T04014
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ars
Arsenicicoccus sp. oral taxon 190
Pathway
ars03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ars00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ADJ73_08025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ars03021
]
ADJ73_08025
03400 DNA repair and recombination proteins [BR:
ars03400
]
ADJ73_08025
Enzymes [BR:
ars01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ADJ73_08025
Transcription machinery [BR:
ars03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ADJ73_08025
DNA repair and recombination proteins [BR:
ars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ADJ73_08025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AKT51273
UniProt:
A0A0K1F9S9
LinkDB
All DBs
Position
1:1691040..1694924
Genome browser
AA seq
1294 aa
AA seq
DB search
MLDVNFFDELRIGLATADSIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDTEARHRDLPSLEAQIEVEKKEHENRRDSDVEARAKKLEED
LAALEAEGAKSDVKRKLKDSAEREMNAIRKRADVHVERLEQVWDRFKNLKVQDLEGDEML
YREMRDRFGLYFEGGMGAAAIQKRLETFDLEAESELLREIIATGKGQKKTRALKRLKVVT
AFQTTSNSPTGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLDHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCGAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMIIGLFHLTSEVADGKGSGR
AFRTSDEARMAFDAGEIELGSPVKIRLRDAVPPVGFDLPEGVELSEEGRADFVMDTTLGR
ALFNLTLPVDYPFVNEPVDKKRLSAIVNDLAERYPKVLVATSLDALKETGFHWATRSGTT
VAISDVVTPSNKESILEGYEAKAAKVQVQFERGLTTDDERRQELIEIWQQATNEVSKEME
ANFPRRNPIFRMVSSGARGNWFQLRQIAGMRGLMANPKGEIIPRPIKSNFREGLSVLEFF
ISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTDRGLLMPIAVRGADGTL
RPHEDVESSVYARTLAEDVVKDGEVLAEAGLDLGDVVIDALVVAGIEEVRVRSVLTCESR
VGTCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPR
VVELFEARTPRGVAPIAEATGRVRIEDTDKARRIVLVPDDGTDEHAYPVTKRSRLLVGDG
DHIEVGTQLVQGAIDPKQVLRILGPRAVQMHLVDQVQAVYRQQGVSIHDKHIEVIVRQML
RRVTIIEAGDADLLPGELAERGRFESENRRVVSEGGKPASGRPELMGITKASLATESWLS
AASFQETTRVLTEAAMHAKSDPLLGLKENVILGKLIPAGTGLPRYRNVKVNPTEEAKAAM
YSMPGYDQFDYTAFGPGSGEAIRLDDITLGFDTH
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttctttgacgagctgcgtatcggcctcgccaccgcggactccatc
cgccagtggtcccacggcgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgtgagcggatgggccacatcgagctcgccgccccc
gtcacccacatctggtacttcaagggcgtgccgagccgtctcggctacctgctcgacctg
gccccgaaggacctggagaaggtcatctacttcgcggcctacatgatcacctcggtcgac
accgaggcgcgccaccgcgacctgccgtcgctggaggcccagatcgaggtcgagaagaag
gagcacgagaaccgtcgtgactccgacgtcgaggcccgcgccaagaagctcgaggaggac
ctggccgcgctcgaggccgagggcgccaagagcgacgtcaagcgcaagctcaaggactcc
gccgagcgcgagatgaacgccatccgcaagcgcgcggacgtgcacgtcgagcgcctcgag
caggtctgggaccgcttcaagaacctcaaggtccaggacctcgagggcgacgagatgctc
taccgcgagatgcgggaccgcttcggtctctacttcgagggcggcatgggcgcggcggcg
atccagaagcgcctggagaccttcgacctcgaggccgagtcggagctgctgcgcgagatc
atcgccaccggcaagggccagaagaagacccgcgccctcaagcgcctcaaggtcgtcacg
gccttccagacgacgagcaacagcccgaccggcatggtgctcgactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagcttgacggtggccggttcgcgacgtcggacctc
aacgacctctaccgtcgcgtcatcaaccgcaacaaccgcctcaagcgcctcctcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctcttcgacaacggccgtcgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaacctcctcggcaag
cgcgtcgactactccggccgctcggtcatcgtcgtcggcccccagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcgaccacgcgcagaacatcaagtccgccaagcgcatggtggagcgcgcccgc
ccggtcgtgtgggacgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgc
gcacccacgctgcaccgcctcggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctcgtctgcggcgcgttcaacgccgacttcgacggtgaccag
atggccgtgcacgtgccgctgtccgcggaggcccaggccgaggcccgcatcctgatgctg
tcctccaacaacatcctcaagccggccgacggccgccccgtgaccatgcccacccaggac
atgatcatcgggctgttccacctcacctccgaggtggccgacggcaagggctccggtcgc
gccttccgcacctctgacgaggcgcggatggccttcgacgcgggcgagatcgagctcggg
tcgcccgtcaagatccggctgcgcgacgccgtccccccggtgggcttcgaccttcccgag
ggtgtcgagctgagcgaggagggccgggcggacttcgtcatggacaccacgctggggcgt
gcgctgttcaacctgacgctgccggtcgactaccccttcgtcaacgagcccgtcgacaag
aagcggctctccgcgatcgtcaacgacctcgccgagcgctaccccaaggtgctcgtggcg
acctcgctggacgcgctcaaggagaccggcttccactgggcgacccgctcgggcacgacc
gtggcgatctccgacgtcgtcacgccctccaacaaggagtccatcctcgagggctacgag
gccaaggccgccaaggtccaggtgcagttcgagcgcggtctgaccaccgacgacgagcgg
cgccaggagctcatcgagatctggcagcaggccaccaacgaggtctccaaggagatggag
gccaacttcccgcggcgcaacccgatcttccgcatggtcagctcgggggcgcgaggcaac
tggttccagctgcggcagatcgccggcatgcgtggcctcatggccaacccgaagggcgag
atcatcccgcgcccgatcaagtccaacttccgcgagggcctgtccgtgctggagttcttc
atctccacgcacggtgcccgcaagggtctggcggacaccgccctgcggaccgccgactcg
ggctacctgacccgtcgcctggtggacgtctcgcaggacgtcatcatccgcgaggacgac
tgcggcaccgaccgcggcctgctgatgccgatcgccgtgcgcggcgccgacggcaccctg
cggccgcacgaggacgtcgagtccagcgtctacgcccgcacgctcgccgaggacgtcgtc
aaggacggcgaggtgctggccgaggccggcctcgacctcggtgacgtggtcatcgacgcg
ctggtcgtcgcggggatcgaggaggtgcgggtccgctcggtcctcacctgcgagtcccgc
gtcggcacctgcgccaagtgctacgggcggtccctggccaccggcaagctcgtcgacatc
ggcgaggccgtcggcatcatcgccgcccagtccatcggcgagcccggcacccagctgacg
atgcgcaccttccacaccggtggtgtggccggtgacgacatcacgcagggtctgccccgt
gtggtcgagctcttcgaggctcgcaccccgcgcggtgtcgccccgatcgccgaggccacg
ggccgcgtgcgcatcgaggacaccgacaaggcgcgccggatcgtgctggtgccggacgac
ggcaccgacgagcacgcctacccggtcaccaagcgctcccgcctcctggtgggcgacggg
gaccacatcgaggtcggcacccagctcgtgcagggcgccatcgaccccaagcaggtgctg
cgcatcctcggcccccgcgccgtgcagatgcacctcgtggaccaggtgcaggcggtctac
cgccagcagggtgtgtcgatccacgacaagcacatcgaggtcatcgtgcgccagatgctg
cggcgcgtgacgatcatcgaggccggcgacgccgacctgctccccggcgagctcgccgag
cgcggtcgcttcgagtccgagaaccgccgcgtcgtctccgagggcggcaagccggcctcg
ggtcgaccggagctcatgggcatcaccaaggcctcgctcgccaccgagtcctggctctcg
gccgcctccttccaggagacgacccgggtgctcaccgaggctgcgatgcacgccaagagc
gacccgctgctgggcctcaaggagaacgtcatcctcggcaagctcatccccgccggcacc
ggcctgccgcgttaccgcaacgtcaaggtcaacccgacggaggaggccaaggcggcgatg
tactccatgcctggctacgaccagttcgactacacggccttcgggccggggtcgggcgag
gccatccgtttggacgacatcacgctgggcttcgacacccactga
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