Arsenophonus sp. aPb: QE177_03165
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Entry
QE177_03165 CDS
T11176
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
arse Arsenophonus sp. aPb
Brite
KEGG Orthology (KO) [BR:
arse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arse03009
]
QE177_03165 (rlmD)
Enzymes [BR:
arse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
QE177_03165 (rlmD)
Ribosome biogenesis [BR:
arse03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QE177_03165 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
TRAM
RrnaAD
Methyltransf_11
TRM5-TYW2_MTfase
MTS
Methyltransf_23
Methyltransf_15
Cons_hypoth95
DUF1173
DOT1
Motif
Other DBs
NCBI-ProteinID:
WGL98914
UniProt:
A0AA95GNX9
LinkDB
All DBs
Position
738286..739626
Genome browser
AA seq
446 aa
AA seq
DB search
MVQFYSSRQRKVKPDNLTVIAESLDAHGQGVAHYQGKTIFITNLLPGEQAQIQLTEEKRQ
FAKAKVSKRLTDSLDRVAPFCRHFGICGGCQQQHVTSTLQRAAKVSRLEYLFQRETGRAV
KSLPVIAGSEYGYRRRARFGLHYQQSERRLRMGFRQSQSNVLVELKMCPVLQPELEKLLL
PVADCLNKLAAVKHLGHVELVNADNGVSVILRHLKPLVTDDKMLLTAFARSYNLNVYLID
NSANRLKLISSASNDSDPYYSIENVKLTFDPQNFIQVNPEINKKMVAQALDWLALESKDR
VLDLFCGMGNFTLPIARHVHSVVGVEGVAELVAQGRYNASLNRLTNVEFYQADLERDIGC
HPWAKMGFNKILLDPARAGAIGVMSHIIKFKPERVVYISCNPTTLVKDSKQLLTAGYQLI
SVRMLDMFPHTSHLESMALFCRDSSK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtacaattttattcttccaggcagcgtaaagttaagcccgataatttgacagtaata
gctgaaagtcttgatgctcatggccaaggtgtcgcgcattatcaaggaaaaacaatcttt
attactaatttacttccaggtgagcaagcacaaattcaacttacggaagagaaaagacaa
tttgccaaagcaaaagtgagcaaacgattgactgatagccttgatcgggtggcacctttt
tgtcgtcattttggcatctgtggcggttgtcaacaacaacatgtgacgtcaactcttcaa
cgtgcggctaaagtcagtaggttagaatatttatttcaacgtgaaacgggaagagcagta
aaatcattgccggttatcgcaggtagtgagtatggatatcgtcgtagagcgaggtttggt
ctccactatcaacagtcagaacgtcgcttacgaatgggatttcgccaaagccaatcaaat
gtattggtagaactgaaaatgtgtcctgtattacaaccagaactagaaaaattattactg
cctgttgctgactgcttaaacaaattggcagcagttaaacacttaggacatgttgagctt
gttaatgcggataacggtgttagtgttatcttacgtcatcttaaaccgttagttactgat
gataaaatgttattaactgcctttgccagaagctataatctcaatgtttatttgatcgac
aatagtgccaatcggcttaaacttattagttcagcaagtaatgatagtgatccttattat
tctattgagaatgtgaaattgacatttgatccgcaaaattttattcaagtaaatcccgaa
atcaataaaaaaatggttgctcaagcgttggattggttagcgcttgagtcgaaagatagg
gttttggatctattttgtggcatgggtaattttaccttacccatcgcacgtcatgttcat
tcggttgttggtgttgaaggcgttgctgaattggtagcgcaagggcgttataacgctagt
ttaaatcgattaactaatgttgagttttatcaagctgatcttgagcgtgacataggttgc
cacccttgggcaaaaatgggttttaacaaaattttattagatcctgcacgcgcgggtgct
ataggcgtaatgtcacatattatcaagtttaagccagaacgggttgtttatatctcctgc
aacccaacgacattagtaaaagatagtaaacaattacttacagccggttatcaacttata
agtgtcaggatgttagatatgtttccgcatactagtcatcttgagtctatggcacttttt
tgtcgcgattcaagcaaatag
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