Arsenophonus sp. aPb: QE177_05990
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Entry
QE177_05990 CDS
T11176
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
arse Arsenophonus sp. aPb
Pathway
arse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QE177_05990 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arse03019
]
QE177_05990 (rhlE)
Enzymes [BR:
arse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QE177_05990 (rhlE)
Messenger RNA biogenesis [BR:
arse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QE177_05990 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UTP25_NTPase-like
HI1480
CMS1
Motif
Other DBs
NCBI-ProteinID:
WGL99419
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All DBs
Position
1354169..1355467
Genome browser
AA seq
432 aa
AA seq
DB search
MCFNSLGLSVEILSAIKEVGYEKPTLIQQQAIPAILAGKDLLASAQTGTGKTAGFVLPIL
QHLSQTPVAVKGKKPVRALILAPTRELAAQVGQNVRDYSQFLRLKSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLVQQNAVSLSQVEILVLDEADRMLDMGFIHDIRRILNKLPPK
RQNLLFSATFSNQIKQLANSLLHNPTILEVAPRNSASQQVKQLIHFVDKRRKAELLSYLI
GSENWQQVLVFTRTKYGANRLTEHLIKDGIKAMAIHGNKSQGARTRALADFKSGAIRVLV
ATDIAARGLDIEQLPYVVNYELPNVAEDYVHRIGRTGRAAATGLAVSLVAIDEQSLLTAI
ERLLKQSIPRMALAGYEPDPTIKPEPMPQKKPANKQHRRHSAAKASHANGQSLKQRTTRN
VDNKTLAPKKSR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttaactcattgggtttatctgtagagatattatcggcgattaaagaggttggt
tatgaaaagccgactttaattcagcaacaggcaataccagcaatattagcgggaaaagat
ctgttggccagtgcacagacaggaaccggcaaaaccgcaggatttgttttacctatatta
caacatcttagtcagacgcccgttgctgtaaaaggtaaaaaacccgtgcgggcactaata
ttggcaccgacccgtgaattagctgctcaggttggtcaaaatgtacgtgattatagtcag
tttttgcgtttaaaatcgttggtcgtttttggtggtgttagcattaacccacaaatgatg
aaattacggggtggagttgatattttagtggccacacccggtcgtttgcttgatttggta
cagcaaaatgctgttagcctgtcacaggttgagattttagtattggatgaagccgatcgg
atgttagatatgggatttattcatgatatacgacggatattaaataaattaccgccaaaa
cggcaaaatttacttttttctgccactttttctaaccaaattaaacaattggctaatagt
ttgctgcataatccgaccatattggaagtggctccgcgtaattccgcctcacagcaggtc
aagcagcttattcattttgttgataaacgacgtaaagcagaattgctttcttatctaatt
ggtagcgaaaactggcagcaggtattagtttttacccgaactaaatacggggctaatcgt
ttaactgaacatctgattaaagatgggattaaggcgatggcaattcatggcaataaaagt
caaggtgcgcgcacgcgagctctggcggattttaaatcaggcgctattcgagtgttggta
gcaactgatattgctgctaggggattagatattgaacagttaccttatgtggtaaattat
gaattacctaatgtggcagaggattatgtgcatcgtattggacgtactggacgcgccgcc
gcgactggtttggccgtttcgctagttgctattgatgagcaaagtttattaacagcgatt
gagcgattattaaaacagagtatcccgcgtatggcattggcaggttatgaacctgatccg
actattaaaccagaaccaatgccgcaaaaaaaaccggcaaacaaacaacatcgacgccat
tcggcagcaaaagcctctcatgctaatggtcaatcattaaaacaacggacaactcgtaac
gttgataataaaacattagcaccaaagaaatccaggtag
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