Arthrobacter sp. FB24: Arth_1539
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Entry
Arth_1539 CDS
T00421
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
art
Arthrobacter sp. FB24
Pathway
art03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
art00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Arth_1539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
art03400
]
Arth_1539
Enzymes [BR:
art01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Arth_1539
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Arth_1539
DNA repair and recombination proteins [BR:
art03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Arth_1539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_8
Zn_ribbon_IS1595
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ABK02933
UniProt:
A0JV63
LinkDB
All DBs
Position
complement(1714818..1715768)
Genome browser
AA seq
316 aa
AA seq
DB search
MHITLPRRERLGGPVWHSSGMPELPEVAGLGAFLGDRLRGAVLTKIQIVSFAVLKTADPP
YTALEGRTISGVQRRGKFIIIDADGIYLAFHLAKAGWLRYTESPSNALLPRGKGYIAARF
EFSRIRPDADGGEAHLGIDLTEAGTKKSLALYVVRDPEDIPGIASLGPDPLSASFTLDAF
AEILSSSSQQIKGLLRNQGVIAGIGNAYSDEILHAARISPFATAKSLDPESVRVLYDSVH
NILGAAVAEAVGKAPNELKDAKRSTMRVHGRTGQACPVCGDTVREVSFADRALQYCPRCQ
TGGKILADRRTSRFLK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcacccttccccgcagggagcgccttggcggacccgtgtggcacagtagtggc
atgccagaacttcccgaagtggccgggctgggcgccttcctgggcgaccggcttcgcgga
gctgtgctgacgaaaatccagatcgtttcgttcgcggtcctcaaaacggcggacccgcca
tatacggcgctggaaggccgcaccatttccggcgtccagcgccggggcaagttcatcatc
attgatgccgacggcatctatctcgcgttccacctcgccaaggccggctggctgcggtac
accgaatcgccgtcgaacgcccttttgccacggggcaaagggtatatagccgcaaggttc
gagttctccaggatccgccctgatgccgacggcggcgaagcccatctggggatcgacctc
accgaggcgggaacaaagaaaagcctggccctctacgtagtccgcgacccggaggatatc
cccggcatcgcaagcctcggcccggatccgttgagcgcctcgttcacccttgacgccttc
gctgaaattctttcctcgagcagccagcagattaagggactgttacgaaaccagggggtg
atcgccggcatcggcaacgcctacagcgacgaaatcctccacgctgcccggatatccccc
ttcgccaccgcgaagtcactcgacccggagtccgtccgcgtcctgtacgactcggtgcac
aacattctgggggccgccgtggcggaggctgtgggaaaggctccgaacgaattgaaggac
gcgaagcggagcaccatgcgggtccatggccggaccggccaggcgtgcccggtctgcggg
gacacggtccgggaggtgtcatttgcggacagggcgctccagtattgcccgcgctgccag
acaggcggcaagatcctcgcggaccggcggacgtcgcgtttcctgaagtag
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