Arthrobacter sp. FB24: Arth_2756
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Entry
Arth_2756 CDS
T00421
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
art
Arthrobacter sp. FB24
Pathway
art03420
Nucleotide excision repair
art03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
art00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Arth_2756
03430 Mismatch repair
Arth_2756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
art03400
]
Arth_2756
Enzymes [BR:
art01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Arth_2756
DNA repair and recombination proteins [BR:
art03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Arth_2756
MMR (mismatch excision repair)
Other MMR factors
Arth_2756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Sulf_transp
Motif
Other DBs
NCBI-ProteinID:
ABK04135
UniProt:
A0JYL5
LinkDB
All DBs
Position
complement(3103157..3106708)
Genome browser
AA seq
1183 aa
AA seq
DB search
MTTPPDVPPARFSPEELTAMLGERNSPTAEQSAIISSPLTPRLVIAGAGSGKTATMADRV
VWLVANGWVRPEEVLGVTFTRKAAGELASRIRSKLSALQRIAAEDTGHRIFPEGLLSEDA
LEPKVSTYHSYASGIVSDYGLRLGVERDVVLLGGAQAWQLASEVVEAFDGEYEHFRAAKS
TLVKAVIQLAGECAEHLRDPAEVQEWLMERVAEFEGLPYVAGAKKNPTQAAGELGAMLRT
RASVAEMVGRYADAKRVRGALDFGDLVALAARVASEIPLAAEVERQRFKVVLLDEFQDTS
HAQLVLFSRLFGGGHAVTAVGDPNQSIYGFRGASAGQLFHFVREFPALAGDSFAVAPTSY
LTTAWRNGRNILSAANVISAPLSAAALQAGPAGERQSAGSVEVPPLQPSPAAAEGKVVIG
RFATDEDEARAIAADVLRYRLTDFEEPVGADRVAPAMAVLCRRRAQMECVRREFELRGIP
YEIVGLGGLLDTPEIVDLVATLRVLADPGRSDSLMRLLAGARWRIGPADLMAFRDWSSFL
ARRRGNPRTDADEADDPDAAVIESDITDSPSLVEALDWLPREGWTSAHGRTLSPAALDRL
HALSAELRQLRGFMGDDLTTLLGEVERAMLLDIEVAARPGVSIHQARRNLDAFHDAAAGF
LHTSHRVDVLAFLAWLEAAATEEGGLDVAAPEVNHEAVQLLTVHASKGLEWDVVFVPGLN
AGAFPSSRDSRWSSGSAALPWPLRGDRADLPQWDTDQPDQKGWLDAEKNFKADVQAHGEA
EERRLAYVAYTRAKFVLWVSSAAWVGSRAGMAEMSPFLSELAPLAGIGAGEAETVAAEGS
TRGRTEAAAGTAAVVHAASVEESLVPAESPLTQDLELAHWPYDPLEGPADPRTGARLRLV
PGRRAAMEAAAGRVREALAAGPDTEPAADSDAGEGPRQLRSFAANWAKEADLLLERRHRR
ATVQDVHLPGHISASTFVDLGDDPAAVLARLRRPVPREPGMSARKGTAFHAWVEEHFGKA
GMLELDEAPGSDSHIDEAYGLDSMVETFRNSEWAHRAPAHVEVPVETRIGEVVVRGRIDA
VFRDADGGWDLVDWKTGRRPAAGQLKVKAVQLAVYRLAWARLKGVPLDSVRAAFYYVGEN
QVVRPHDLGTAEQLEDIVTAALGGTTALLNASGPASGTSRPQS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgactacgccacccgacgtcccgcccgcccggttttccccggaagagctgactgccatg
ctgggcgaacgcaacagccccaccgctgagcagtccgccatcatttcctcgccgctcacc
ccgcggctggttattgccggtgccgggtccggcaagaccgccaccatggcggatcgtgtg
gtgtggcttgttgccaacggctgggtccggccggaagaagtcctgggcgtgacgtttacg
cgcaaggcggccggggaactggccagccggatccgatccaagctctcggccctgcaacgg
attgcggcggaggacaccggccacaggatatttcccgagggcctgctcagcgaggatgcc
ctggaacctaaagtttccacgtaccactcctacgccagcggcatcgtgtccgactacggg
ctccggctcggtgtcgaacgtgatgttgtcctcctgggcggggcgcaggcctggcagctg
gctagcgaagttgttgaggctttcgacggcgaatacgaacatttccgtgctgccaaatcg
acgctcgtcaaagccgtcatccagctcgcgggcgagtgtgccgaacacctgcgcgatccg
gccgaggtgcaggaatggctgatggagcgggtcgcggaatttgaaggcctgccctacgtg
gccggggccaaaaagaacccgacacaggctgccggagaactcggcgccatgctgcgcacc
agggcgagcgtcgccgaaatggtgggcaggtatgctgacgcgaagcgggtccgcggggcg
ttggattttggtgacctggtggcgctcgccgcgcgggtcgccagtgagattccgctggcc
gccgaagtggaacgccagcggttcaaagtggtgctgctcgacgaattccaggacacctcg
catgcccagctagtgctgttttccaggctattcggcggcggccacgccgtgacagccgtg
ggcgaccccaaccagtcgatctacgggttccggggggcgtctgccggccagctcttccat
tttgttcgggagttccctgccctggccggcgattcgtttgccgtggcacccacctcctac
ctgacaaccgcgtggcgtaacgggcgcaacatcctttccgcggccaacgttatttcggcg
ccccttagcgccgccgcgctgcaagccggcccggcgggggagcggcagtcggcgggttcc
gtggaggtcccgccgctgcagcccagtccggctgcggccgaggggaaggttgtcatcgga
cgctttgcgacggatgaggatgaggccagggccatcgcagcggatgtcctgcgctaccgc
ctcacagatttcgaggaacccgtcggcgccgaccgcgtagctcctgcgatggcggtcctg
tgcaggcgccgcgcacagatggaatgcgtccggcgtgagttcgagctgcgcgggatcccc
tacgaaatcgtgggcctcggtggcctcttggacaccccggagatcgtggatctggtcgcc
acgctgcgagtactcgcggatccgggacgttcggatagcctcatgcggcttctggccgga
gcgcgctggcgcattggcccggctgacctcatggcattccgggactggtcatcattcctc
gcgcgccgccgggggaatccgcggacggacgcagatgaagctgacgatccggacgccgcg
gtgatcgagagcgacatcaccgattcgccgagccttgtggaagccttggactggctgccg
cgggaaggatggacctcggcccacggccggacgctgagccctgcagccctcgaccggctg
catgccttgtcggccgaactccggcagctccgcggatttatgggcgatgacctcacgacg
cttctgggcgaagtggaacgggccatgctcctcgacatcgaggtggcggcccgccccggc
gtcagcatccaccaggcccggcgaaacctggacgcattccacgatgccgcggcaggattc
ctccacacctcgcaccgcgtcgatgtcctcgcgttcctggcctggctggaagcagcggca
acggaagagggcgggctggacgtcgcggccccggaggtcaaccacgaagcggtgcagctg
ctgacggtgcacgcgtcaaagggcctggagtgggacgttgtgttcgttcccggcctgaac
gccggagcgtttccgagcagccgggattcgcggtggagcagcggaagcgctgccttgccc
tggccgttgcggggagaccgtgccgacctgccccagtgggacacggaccagccggatcaa
aagggctggctggacgccgaaaagaacttcaaagccgacgtccaggcgcacggagaggcc
gaagaacgcaggctcgcctacgtggcgtacacccgggctaagttcgtgctgtgggtttcg
agcgcggcctgggtcggttcccgggccggtatggcggagatgtcgccattcctctcggag
ctggcgccccttgcagggatcggggcaggtgaagccgaaaccgtggcggcggagggcagc
acccgcgggcggacggaagcggcggccgggaccgccgccgtcgtgcatgccgcatcggtg
gaggaatcattagtgccggcagaaagtccgttgacccaggacctcgaactggcccactgg
ccgtatgacccgttggaaggaccggccgatccgcgcaccggtgccaggctcaggctggtt
ccgggacggcgggcagcgatggaggcagccgccgggcgggtccgcgaagccttggccgct
ggccccgatacggagccggcggcggattcggacgcaggggaggggccccggcagctccgg
agcttcgcggccaactgggcgaaggaagctgacctgttgttggagcgccgccatcgcagg
gccaccgtgcaggacgtccacctgccgggccacatttccgcgtcaacgttcgtggatctc
ggtgacgatcctgcagcagtgcttgcgcggctgcggcggccggttcccagggaaccgggg
atgtccgcccgtaaaggaacggctttccacgcctgggtggaagagcacttcggtaaggcg
ggcatgttggagctggatgaggcccccggttcggacagccacattgacgaggcctacggg
ctggattccatggtggaaacattcaggaattcggagtgggcgcaccgtgctcccgcccat
gtggaggttccggtggagacgcgcataggggaggttgtggtgcgtggccggatcgatgcc
gtgttccgggacgccgacggcggctgggacctggtggactggaagacgggccgacgcccg
gccgcgggacagttgaaggtgaaggctgtccagctggccgtctatcgtcttgcctgggcg
cggctcaagggagttccgctcgacagtgtccgggcagcgttctactacgtgggggaaaac
caggtggtgcgcccccacgaccttggcacagccgagcagctcgaggacatcgttacggct
gccctcggcggaacgacagccctgctcaacgcctccggccccgctagtgggacttcgcgt
ccacaatcttga
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