Arthrobacter sp. ATA002: OL239_04725
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Entry
OL239_04725 CDS
T10700
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
arta Arthrobacter sp. ATA002
Pathway
arta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OL239_04725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arta03021
]
OL239_04725
03400 DNA repair and recombination proteins [BR:
arta03400
]
OL239_04725
Enzymes [BR:
arta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OL239_04725
Transcription machinery [BR:
arta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OL239_04725
DNA repair and recombination proteins [BR:
arta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OL239_04725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4407
DUF1843
Motif
Other DBs
NCBI-ProteinID:
WAP52549
LinkDB
All DBs
Position
929848..933738
Genome browser
AA seq
1296 aa
AA seq
DB search
MSNDSTFGLMRIGLATADEIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEENRHAELPNLQAEHDLERKHLVDQRDSDIAAIAKDLEGE
IARLEGEGAKAADKKKARDSADRQMAKVRRDADNNIERLEQVWERFKNLKVGDLEGDEGL
YRELRDRYGLYFEGSMGAEAIKQRLEDFDMQAESELLRDIIQNGKGQRKTRALKRLKVVN
AFLTTTNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERFR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKALQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLHHLTTKKEGAAGEGR
FFTTPSEALMAYDLGELDLNAQISMRLEGFVPSADRPAPEGWEEGTPALIQTSLGQVIFN
QALPSDYPWVEKVADKGQLSAIVNDLAERYPKVITAATLDNLKDAGFYWATRSGVTVAIS
DISAPIDKPAIMEVYETQAAKVESQYGKGLIAEDERRQELIDIWNKATNEVAAAMRSNMP
KENNINRMVSSGARGNWLQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLNVTIAVPDSNGELQLHE
EVENSAYARTLATDVADAQGNVLAKGGDDVGDVLIAKLFEAGVTDIKVRSVLTCESAVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRIQ
ELFEARTPKGVAPISETAGRVTIEESDRQMRLVVTPDDGSEEIAYPVLRRARLLVADGDH
VEVGQQLVFGAVDPKQILRILGPRKAQEFLVDEVQRVYRSQGVGIHDKHVEVIVRQMLRR
VTVIESGDSELLPGELAERRRFESENRRVVSEGKKPASGRPELMGITKASLATESWLSAA
SFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKANLFT
GPSAFSDFDYAGVDGGLSPEFHAIPLDDYDMGSDFR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgattccacgttcggcctcatgcgtatcggccttgccactgcggatgaaatc
cgcggctggtcttacggcgaagtcaagaagccggaaaccatcaactaccgaaccctgaag
ccggagaaggacggtcttttctgcgaaaagatcttcggtccgtcccgtgactgggagtgc
tactgcggtaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggttacccgcgccaaggttcgccgcgagcgcatgggccacattgagctcgccgccccc
gtaacccacatctggtacttcaagggtgttccgtcccgcctgggctacctgctggacctg
gcgccgaaggacctggagaaggtcatttacttcgccgcttacatgatcacctcggttgac
gaagaaaaccgccacgcggaacttccgaacctgcaggctgaacacgacctggagcgcaag
cacctcgtcgaccagcgcgactccgatattgctgccattgccaaggacctcgaaggcgag
attgcccgcctcgagggcgaaggcgccaaggctgccgacaagaagaaggcccgcgactcc
gccgaccgccagatggccaaggtccgccgcgacgccgacaacaacatcgagcgcctcgag
caggtttgggaacgcttcaagaacctcaaggtcggcgacctcgagggcgatgagggcctg
taccgcgaactgcgtgaccgctacggcctgtacttcgaaggctccatgggtgccgaagcc
atcaagcagcgccttgaggacttcgacatgcaggctgagtccgagctgctgcgcgacatc
atccagaacggcaagggccagcgcaagacgcgtgccctgaagcgcctgaaggttgtcaac
gccttcctgaccacgaccaacagcccgctcggcatggtcctggacgcagttccggtgatc
ccgccggaactgcgcccgatggttcagctcgacggcggacgtttcgcgacgtccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgcctgctggacctc
ggtgcccccgagatcatcgtgaacaacgaaaagcgcatgctccaggaagctgttgactcc
ctgttcgacaacggccgccgcggccgtccggtcaccggtccgggcaaccgtccgctgaag
tcgctctccgacatgctcaagggcaagcagggacgtttccgccagaacctgctgggtaag
cgtgttgactactccggccgttccgtcatcgttgttggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagagcgccaagcgcatggtcgagcgtttccgc
ccgcaggtctgggacgtgctggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacccaccctgcaccgcctcggtatccaggccttcgagccgcagctcgttgagggcaag
gcccttcagctgcacccgctggtctgcggcgcgttcaatgctgacttcgacggtgaccag
atggcagtgcacctgccgctgagccccgaagcccaggctgaagcacgcatcctgatgctg
tcctcgaacaacatcctgaagccgtccgacggccgcccggtgaccctgccgtcgcaggat
atgatcatcggcctgcaccacctcaccaccaagaaggaaggcgcagcaggcgagggccgg
ttcttcacgacgccgtccgaagccctgatggcgtacgaccttggtgagctggacctgaac
gcccagatcagcatgcgcctggaaggcttcgtgccctccgccgaccgtccggccccggaa
ggctgggaagaaggcactcccgccctcatccagacctccctcggccaggtcatcttcaac
caggcactgccctcggattacccgtgggtcgagaaggttgccgataagggccagctgtca
gcgatcgtgaacgacctggctgagcgctacccgaaggtcattacggcggcaacgctggat
aacctgaaggacgccggtttctactgggccacccgctcgggcgttaccgttgccatctcg
gacatctccgcgccgatcgacaagcctgccatcatggaggtttacgaaacgcaggctgcc
aaggttgaaagccagtacggcaagggcctgatcgccgaagacgagcgccgccaggaactc
atcgacatctggaacaaggctacgaacgaagttgccgcggccatgcgttcgaacatgccc
aaggaaaacaacatcaaccgcatggtgtcttccggtgcccgtggtaactggctgcaggtt
cgccagattgccggtatccgcggcctggtggcaaaccccaagggtgagatcatcccgcgc
ccgatcaagtcgtcgtaccgtgagggcctgtcggtgctggagtacttcatcgccacccac
ggtgcccgaaagggtcttgccgacaccgctctgcgtaccgccaactcgggttacctgacc
cgccgtctggtggacgtttcccaggacgtcattgtccgcgaggaagactgcggcaccgag
cgcggcctgaacgtgaccattgcggttccggactccaacggtgaactgcagctgcacgaa
gaggtcgagaactcggcgtacgcccgtacgctggccaccgacgtcgccgacgcccagggc
aacgtcctggccaagggcggcgacgatgttggcgacgtcctcatcgccaagctgttcgaa
gccggcgtcaccgatatcaaggtccgctccgtactcacctgtgagtccgccgtcggcacc
tgtgccctgtgctacggacgctccctggccacgggtaagaccgtggacatcggcgaggct
gtcggcattatcgctgctcagtccattggcgagccgggcactcagctgaccatgcgtacc
ttccacaccggtggtgttgcttccgcggaagatatcacccagggtctgccccgtatccag
gagctcttcgaagcacgcacccccaagggcgttgctccgatctccgagactgcgggccgg
gtcaccatcgaagagtccgaccgccagatgcgtctggttgtcactcccgatgacggctcc
gaggaaatcgcgtacccggtcctgcgccgtgcccgcctgctggttgccgacggcgaccac
gtcgaggttggccagcagctggtcttcggtgcggtggatcccaagcagatcctccgtatc
ctcggcccgcgcaaggcacaggaattcctggtggacgaagtccagcgcgtgtaccgcagc
cagggcgtaggcatccacgacaagcacgtggaagtcatcgtccggcagatgctgcgccgc
gtgaccgtgattgagtccggcgactccgagctgcttccgggcgagctcgccgagcgccgc
cgcttcgaaagcgagaaccgccgcgttgtctccgagggcaagaagccggcttcaggccgt
cccgagctcatgggtatcaccaaggcgtcgctggcaaccgagtcctggctgtccgctgct
tccttccaggaaaccacccgcgtcctgacgcaggcggccatggaaggcaagagcgatccg
ctgctcggcctcaaggagaacgtcatcatcggtaagctgatcccggccggaacgggcctg
ccccgttacaccgaggtcactgtcgagccgaccgaagaagcaaaggccaatctgttcacc
ggcccgagcgccttcagcgacttcgactacgccggagtagacggcggcctgagccccgag
ttccacgccatcccgctggatgactacgacatgggcagcgacttccgctaa
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